STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ07423.1KEGG: ter:Tery_1229 hypothetical protein; SPTR: Putative uncharacterized protein. (89 aa)    
Predicted Functional Partners:
AFZ07422.1
Polyamine-transporting ATPase; PFAM: ABC transporter; COGs: COG1122 ABC-type cobalt transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: npu:Npun_R4551 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Polyamine-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related.
       0.791
AFZ06709.1
PFAM: Protein of unknown function (DUF3146); KEGG: ter:Tery_2871 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.774
AFZ08491.1
PFAM: Protein of unknown function (DUF2839); KEGG: cyn:Cyan7425_0942 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.774
AFZ10307.1
PFAM: Protein of unknown function (DUF3120); KEGG: cyt:cce_1935 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.772
AFZ07991.1
KEGG: ava:Ava_2412 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.769
AFZ08033.1
PFAM: Alpha/beta hydrolase of unknown function (DUF1400); InterPro IPR010802; KEGG: ter:Tery_2897 hypothetical protein; PFAM: Domain of unknown function DUF1400; SPTR: Putative uncharacterized protein.
  
     0.768
AFZ05996.1
KEGG: ter:Tery_3950 TPR repeat-containing protein; SPTR: TPR repeat-containing protein.
  
     0.764
AFZ08381.1
KEGG: ter:Tery_2185 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.761
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.758
AFZ05674.1
PFAM: Protein of unknown function (DUF2862); KEGG: syf:Synpcc7942_2086 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.757
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.