STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ07551.1Cyclase/dehydrase; PFAM: Polyketide cyclase / dehydrase and lipid transport; COGs: COG4276 conserved hypothetical protein; InterPro IPR005031; KEGG: cyc:PCC7424_4393 cyclase/dehydrase; PFAM: Streptomyces cyclase/dehydrase; SPTR: Cyclase/dehydrase. (153 aa)    
Predicted Functional Partners:
AFZ05999.1
Protein of unknown function DUF1731; PFAM: NAD dependent epimerase/dehydratase family; Domain of unknown function (DUF1731); TIGRFAM: TIGR01777 family protein; COGs: COG1090 nucleoside-diphosphate sugar epimerase; InterPro IPR010099:IPR001509:IPR013549; KEGG: cyc:PCC7424_4516 domain of unknown function DUF1731; PFAM: Domain of unknown function DUF1731, C-terminal; NAD-dependent epimerase/dehydratase; SPTR: Putative uncharacterized protein.
      0.910
AFZ07552.1
KEGG: cyj:Cyan7822_0326 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.782
AFZ07549.1
Addiction module killer protein; PFAM: Phage derived protein Gp49-like (DUF891); TIGRFAM: putative addiction module killer protein; COGs: COG3657 conserved hypothetical protein; InterPro IPR014056:IPR009241; KEGG: ana:all2402 hypothetical protein; PFAM: Protein of unknown function DUF891; SPTR: Putative uncharacterized protein; TIGRFAM: Addiction module killer protein, HI1419.
       0.741
AFZ07550.1
KEGG: mar:MAE_36830 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.741
AFZ07548.1
PFAM: Radical SAM superfamily; COGs: COG1032 Fe-S oxidoreductase; InterPro IPR006638:IPR007197; KEGG: npu:Npun_F4794 radical SAM domain-containing protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Radical SAM family protein.
       0.492
AFZ09292.1
KEGG: syf:Synpcc7942_0491 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
  
     0.470
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.