STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ07568.1KEGG: cyc:PCC7424_0728 hypothetical protein; SPTR: Putative uncharacterized protein. (94 aa)    
Predicted Functional Partners:
AFZ07567.1
KEGG: cyt:cce_1228 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
AFZ07566.1
KEGG: mar:MAE_60330 type II restriction enzyme NspV-like protein; SPTR: Modification methylase NspV.
       0.578
AFZ07569.1
KEGG: cyt:cce_2021 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.576
AFZ07565.1
PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: npu:Npun_F5649 hypothetical protein; PFAM: Domain of unknown function DUF820; SPTR: Putative uncharacterized protein.
       0.470
AFZ07570.1
PFAM: Uncharacterised protein family (UPF0150); COGs: COG1598 conserved hypothetical protein; InterPro IPR005357; KEGG: cyj:Cyan7822_0749 hypothetical protein; PFAM: Uncharacterised protein family UPF0150; SPTR: Putative uncharacterized protein.
       0.420
AFZ07571.1
PFAM: YcfA-like protein; InterPro IPR012933; KEGG: cyc:PCC7424_3214 YcfA family protein; PFAM: Uncharacterised protein family UPF0395; SPTR: YcfA family protein.
       0.420
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.