STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ07588.1Type 1 secretion target domain protein; PFAM: Hemolysin-type calcium-binding repeat (2 copies); TIGRFAM: type 1 secretion C-terminal target domain (VC_A0849 subclass); InterPro IPR019960:IPR001343; KEGG: ava:Ava_3265 Ig family protein; PFAM: Haemolysin-type calcium-binding repeat; SPTR: Putative Ig; TIGRFAM: Type 1 secretion, target domain, C-terminal. (541 aa)    
Predicted Functional Partners:
AFZ04678.1
PFAM: Hemolysin-type calcium-binding repeat (2 copies); InterPro IPR001343; KEGG: ter:Tery_2710 hemolysin-type calcium-binding region; PFAM: Haemolysin-type calcium-binding repeat; SPTR: Putative Hemolysin-type calcium-binding region.
 
    
0.928
AFZ05472.1
PFAM: Hemolysin-type calcium-binding repeat (2 copies); InterPro IPR001343; KEGG: ter:Tery_1623 hypothetical protein; PFAM: Haemolysin-type calcium-binding repeat; SPTR: Putative uncharacterized protein.
 
    
0.928
AFZ06103.1
PFAM: Hemolysin-type calcium-binding repeat (2 copies); InterPro IPR001343; KEGG: cyj:Cyan7822_1606 peptidase S8 and S53 subtilisin kexin sedolisin; PFAM: Haemolysin-type calcium-binding repeat; SPTR: Putative uncharacterized protein.
 
    
0.927
AFZ08471.1
PFAM: Hemolysin-type calcium-binding repeat (2 copies); InterPro IPR001343; KEGG: amr:AM1_6219 hemolysin-type calcium-binding region protein; PFAM: Haemolysin-type calcium-binding repeat; SPTR: Hemolysin-type calcium-binding region.
 
    
0.925
AFZ10297.1
PFAM: Hemolysin-type calcium-binding repeat (2 copies); InterPro IPR001343; KEGG: ter:Tery_0387 cadherin; PFAM: Haemolysin-type calcium-binding repeat; SPTR: Cadherin.
 
    
0.860
AFZ06836.1
PFAM: Hemolysin-type calcium-binding repeat (2 copies); InterPro IPR001343; KEGG: ter:Tery_0488 peptidase S8/S53 subtilisin kexin sedolisin; PFAM: Haemolysin-type calcium-binding repeat; SPTR: Putative secreted calcium-binding protein.
  
     0.775
AFZ08349.1
PFAM: Hemolysin-type calcium-binding repeat (2 copies); InterPro IPR001343; KEGG: cyj:Cyan7822_1606 peptidase S8 and S53 subtilisin kexin sedolisin; PFAM: Haemolysin-type calcium-binding repeat; SPTR: Putative uncharacterized protein.
  
     0.775
AFZ08553.1
Hemolysin-type calcium-binding region; PFAM: Cysteine-rich secretory protein family; Hemolysin-type calcium-binding repeat (2 copies); InterPro IPR001343:IPR014044; KEGG: ter:Tery_4191 hemolysin-type calcium-binding region; PFAM: Haemolysin-type calcium-binding repeat; CAP domain; SPTR: Putative uncharacterized protein.
  
     0.775
AFZ10379.1
Hypothetical protein; PFAM: Hemolysin-type calcium-binding repeat (2 copies); InterPro IPR001343; KEGG: ana:alr4072 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.761
AFZ08773.1
PFAM: Domain of unknown function DUF11; TIGRFAM: conserved repeat domain; COGs: COG0810 Periplasmic protein TonB links inner and outer membranes; InterPro IPR001434:IPR001343; KEGG: ter:Tery_4644 allergen V5/TPX-1 related; PFAM: Domain of unknown function DUF11; Haemolysin-type calcium-binding repeat; SPTR: Putative uncharacterized protein; TIGRFAM: Domain of unknown function DUF11.
  
 
   0.757
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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