STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ07695.1Protein of unknown function DUF847; PFAM: Predicted Peptidoglycan domain; Predicted lysozyme (DUF847); COGs: COG3926 Putative secretion activating protein; InterPro IPR008565:IPR018537; KEGG: ter:Tery_4946 hypothetical protein; PFAM: Protein of unknown function DUF847; Peptidoglycan binding domain; SPTR: Putative uncharacterized protein. (221 aa)    
Predicted Functional Partners:
AFZ08443.1
Methyltransferase type 12; COGs: COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol methylase; InterPro IPR013217; KEGG: ter:Tery_3450 methyltransferase type 12; PFAM: Methyltransferase type 12; SPTR: Methyltransferase type 12.
  
     0.677
AFZ04741.1
Secretion protein HlyD family protein; InterPro IPR006143; KEGG: ter:Tery_1351 chromosome segregation ATPase-like protein; PFAM: Secretion protein HlyD; SPTR: Chromosome segregation ATPase-like protein.
  
     0.668
AFZ07694.1
Tetratricopeptide TPR_1 repeat-containing protein; PFAM: Tetratricopeptide repeat; COGs: COG3914 O-linked N-acetylglucosamine transferase SPINDLY family; InterPro IPR013105:IPR001440:IPR019734; KEGG: ter:Tery_4945 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR2; SMART: Tetratricopeptide repeat; SPTR: TPR repeat-containing protein.
 
     0.607
AFZ10280.1
KEGG: ter:Tery_0612 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.568
AFZ07954.1
Hypothetical protein; PFAM: Clostridial hydrophobic W; InterPro IPR006637; KEGG: ter:Tery_2459 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.536
AFZ05431.1
PFAM: Protein-arginine deiminase (PAD); InterPro IPR013530; KEGG: ter:Tery_4936 protein-arginine deiminase; PFAM: Protein-arginine deiminase, C-terminal; PRIAM: Protein-arginine deiminase; SPTR: Protein-arginine deiminase.
  
     0.525
AFZ06821.1
ADP-ribosylation/Crystallin J1; PFAM: ADP-ribosylglycohydrolase; InterPro IPR005502; KEGG: ter:Tery_2665 hypothetical protein; PFAM: ADP-ribosylation/Crystallin J1; SPTR: Putative uncharacterized protein.
  
     0.510
AFZ05748.1
Multi-sensor signal transduction histidine kinase; PFAM: CBS domain; GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG2205 Osmosensitive K+ channel histidine kinase; InterPro IPR000644:IPR003018:IPR003661:IPR003594; KEGG: ter:Tery_4749 multi-sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; GAF; Cystathionine beta-synthase, core; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: GAF; Cystathionine beta-synthase, core; Signal transduction hist [...]
  
    0.503
AFZ04966.1
PFAM: Glycosyl transferases group 1; Glycosyl transferase family 2; COGs: COG0438 Glycosyltransferase; InterPro IPR001173:IPR001296; KEGG: ter:Tery_1360 glycosyl transferase, group 1; PFAM: Glycosyl transferase, group 1; Glycosyl transferase, family 2; SPTR: Glycosyl transferase, group 1.
  
    0.499
AFZ07615.1
PFAM: Cna protein B-type domain; InterPro IPR008454; KEGG: ter:Tery_3048 Cna B-type; PFAM: Collagen-binding surface protein Cna-like, B-type domain; SPTR: Putative uncharacterized protein.
  
     0.481
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.