STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ07711.1Peptidase S1 and S6 chymotrypsin/Hap; PFAM: Trypsin; Bacterial pre-peptidase C-terminal domain; COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001254:IPR007280; KEGG: ter:Tery_3710 peptidase S1 and S6, chymotrypsin/Hap; PFAM: Peptidase S1/S6, chymotrypsin/Hap; Peptidase, C-terminal, archaeal/bacterial; SPTR: Putative serine protease. (482 aa)    
Predicted Functional Partners:
AFZ10331.1
PFAM: Ribulose bisphosphate carboxylase, small chain; ATPase family associated with various cellular activities (AAA); COGs: COG4451 Ribulose bisphosphate carboxylase small subunit; InterPro IPR000894:IPR003959; KEGG: ava:Ava_3903 ribulose 1,5-bisphosphate carboxylase small subunit; PFAM: Ribulose bisphosphate carboxylase, small chain; ATPase, AAA-type, core; SMART: Ribulose bisphosphate carboxylase, small chain; SPTR: Ribulose bisphosphate carboxylase/oxygenase activase.
    
 0.529
AFZ07710.1
Prolyl 4-hydroxylase alpha subunit; InterPro IPR006620; KEGG: pzu:PHZ_c2646 hypothetical protein; SMART: Prolyl 4-hydroxylase, alpha subunit; SPTR: Putative bacterioferritin comigratory (BCP) protein.
  
    0.515
AFZ07816.1
Adenylate/guanylate cyclase with GAF sensor(s); PFAM: Adenylate and Guanylate cyclase catalytic domain; Response regulator receiver domain; GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterProIPR001789:IPR003018:IPR003661:IPR003594:IPR 001054; KEGG: ter:Tery_3155 adenylate/guanylate cyclase; PFAM: ATPase-like, ATP-binding domain; Signal transduction response regulator, receiver domain; GAF; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor dom [...]
 
  
 0.502
AFZ09980.1
Peptidase S1 and S6 chymotrypsin/Hap; PFAM: Trypsin; COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001254; KEGG: ter:Tery_0291 TPR repeat-containing protein; PFAM: Peptidase S1/S6, chymotrypsin/Hap; SPTR: TPR repeat-containing protein.
  
     0.499
AFZ07712.1
PFAM: Bacterial pre-peptidase C-terminal domain; InterPro IPR007280; KEGG: ter:Tery_3711 peptidase-like; PFAM: Peptidase, C-terminal, archaeal/bacterial; SPTR: Putative Peptidase-like.
 
    
0.457
AFZ07659.1
Urocanate hydratase; InterPro IPR006311; KEGG: ter:Tery_3701 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.413
AFZ10343.1
Integral membrane sensor hybrid histidine kinase; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; TIGRFAM: urea ABC transporter, urea binding protein; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterProIPR017777:IPR003660:IPR003661:IPR003594:IPR 001789:IPR001828; KEGG: scl:sce5579 putative branched-chain amino acid transport system substrate-binding protein; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subg [...]
  
  
 0.408
AFZ08658.1
PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: cyc:PCC7424_2174 protein of unknown function DUF820; PFAM: Domain of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
     0.405
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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