STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ07802.1Abortive infection protein; PFAM: CAAX amino terminal protease family; COGs: COG4449 protease of the Abi (CAAX) family; InterPro IPR003675; KEGG: cyc:PCC7424_2336 abortive infection protein; PFAM: Abortive infection protein; SPTR: Abortive infection protein. (183 aa)    
Predicted Functional Partners:
AFZ08796.1
Abortive infection protein; COGs: COG4449 protease of the Abi (CAAX) family; KEGG: cyc:PCC7424_2336 abortive infection protein; SPTR: Abortive infection protein.
 
      0.726
AFZ07801.1
PBS lyase HEAT domain protein repeat-containing protein; PFAM: PBS lyase HEAT-like repeat; InterPro IPR004155; KEGG: xtr:100494109 histone-lysine N-methyltransferase MLL2-like; PFAM: PBS lyase HEAT-like repeat; SPTR: Putative uncharacterized protein.
       0.631
AFZ07803.1
PFAM: Acylphosphatase; COGs: COG1254 Acylphosphatase; HAMAP: Acylphosphatase; InterPro IPR001792; KEGG: npu:Npun_F1030 acylphosphatase; PFAM: Acylphosphatase-like; SPTR: Acylphosphatase.
       0.558
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.