STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ07806.1Peptidase M50; PFAM: CBS domain; Peptidase family M50; COGs: COG1994 Zn-dependent protease; InterPro IPR008915:IPR000644; KEGG: npu:Npun_R1703 peptidase M50; PFAM: Peptidase M50; Cystathionine beta-synthase, core; SPTR: Peptidase M50; Belongs to the peptidase M50B family. (398 aa)    
Predicted Functional Partners:
psaK
PFAM: Photosystem I psaG / psaK; TIGRFAM: photosystem I reaction center subunit PsaK; HAMAP: Photosystem I PsaK, reaction centre; InterPro IPR000549:IPR017492; KEGG: ter:Tery_3921 photosystem I PsaG/PsaK protein; PFAM: Photosystem I PsaG/PsaK protein; SPTR: Photosystem I reaction center subunit PsaK; TIGRFAM: Photosystem I PsaK, reaction centre.
       0.571
AFZ05971.1
Pyruvate ferredoxin/flavodoxin oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin.
   
   0.531
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
  
 0.525
AFZ07093.1
Phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; COGs: COG1926 phosphoribosyltransferase; KEGG: ter:Tery_0412 phosphoribosyltransferase; SPTR: Phosphoribosyltransferase.
 
    0.488
ribBA
GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
 0.485
AFZ04745.1
CDP-paratose 2-epimerase; PFAM: NAD dependent epimerase/dehydratase family; COGs: COG1088 dTDP-D-glucose 4 6-dehydratase; InterPro IPR001509; KEGG: ava:Ava_3352 3-beta hydroxysteroid dehydrogenase/isomerase; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: CDP-paratose 2-epimerase; SPTR: 3-beta hydroxysteroid dehydrogenase/isomerase.
  
    0.483
AFZ06355.1
dTDP-glucose 4,6-dehydratase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase; COGs: COG1088 dTDP-D-glucose 4 6-dehydratase; InterPro IPR005888:IPR001509; KEGG: ter:Tery_0957 dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: dTDP-glucose 4,6-dehydratase; SPTR: dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
    0.483
AFZ07392.1
Protein of unknown function DUF151; PFAM: Uncharacterised ACR, COG1259; COGs: COG1259 conserved hypothetical protein; InterPro IPR003729; KEGG: ava:Ava_1415 hypothetical protein; PFAM: Domain of unknown function DUF151; SPTR: Putative uncharacterized protein.
 
     0.457
trpF
PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase; COGs: COG0135 Phosphoribosylanthranilate isomerase; InterPro IPR001240; KEGG: ana:all5288 N-(5'-phosphoribosyl)anthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); SPTR: N-(5'-phosphoribosyl)anthranilate isomerase; Belongs to the TrpF family.
       0.455
AFZ07807.1
Adenylate/guanylate cyclase with Chase sensor; PFAM: Adenylate and Guanylate cyclase catalytic domain; CHASE2 domain; COGs: COG4252 transmembrane sensor domain; InterPro IPR007890:IPR001054; KEGG: ter:Tery_1986 adenylate/guanylate cyclase; PFAM: CHASE2; Adenylyl cyclase class-3/4/guanylyl cyclase; SMART: Adenylyl cyclase class-3/4/guanylyl cyclase; SPTR: Adenylate cyclase.
       0.448
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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