STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ07861.1Hypothetical protein; PFAM: Plasmid maintenance system killer protein; COGs: COG3041 conserved hypothetical protein; KEGG: mar:MAE_10540 hypothetical protein; SPTR: Putative uncharacterized protein. (88 aa)    
Predicted Functional Partners:
AFZ07862.1
KEGG: mar:MAE_18970 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.778
AFZ07863.1
Glycine oxidase; PFAM: FAD dependent oxidoreductase; TIGRFAM: glycine oxidase ThiO; COGs: COG0665 Glycine/D-amino acid oxidase (deaminating); InterPro IPR006076:IPR012727; KEGG: ter:Tery_0284 glycine oxidase ThiO; PFAM: FAD dependent oxidoreductase; PRIAM: Glycine oxidase; SPTR: Fragment of putative Bifunctional protein thiO/thiG; TIGRFAM: Glycine oxidase ThiO.
       0.516
AFZ08786.1
KEGG: cya:CYA_1886 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.504
AFZ09838.1
TIGRFAM: DNA sulfur modification protein DndD; COGs: COG1196 Chromosome segregation ATPase; InterPro IPR017599; KEGG: ter:Tery_1931 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: DNA sulphur modification protein DndD.
  
     0.424
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.