STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ08015.1Secretion protein HlyD family protein; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: ter:Tery_0623 secretion protein HlyD; PFAM: Secretion protein HlyD; SPTR: Secretion protein HlyD. (371 aa)    
Predicted Functional Partners:
AFZ08001.1
PFAM: Peptidase C39 family; ABC transporter transmembrane region; ABC transporter; COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterPro IPR003593:IPR005074:IPR001140:IPR003439; KEGG: ter:Tery_0625 bacteriocin-processing peptidase; PFAM: ABC transporter-like; Peptidase C39, bacteriocin processing; ABC transporter, transmembrane domain; PRIAM: Peptide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Bacteriocin-processing peptidase. Cysteine peptidase. MEROPS family C39.
 
 
 0.851
AFZ10260.1
Cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporters; PFAM: ABC transporter transmembrane region; Peptidase C39 family; ABC transporter; Cyclic nucleotide-binding domain; TIGRFAM: ABC-type bacteriocin transporter; type I secretion system ABC transporter, HlyB family; COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterProIPR003593:IPR000595:IPR005074:IPR001140:IPR 003439; KEGG: cyc:PCC7424_3519 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter; PFAM: ABC transporter-like; Peptidase C39, bacterio [...]
 
 
 0.730
AFZ04740.1
Cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporters; PFAM: Peptidase C39 family; ABC transporter transmembrane region; ABC transporter; Cyclic nucleotide-binding domain; TIGRFAM: type I secretion system ABC transporter, HlyB family; COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterProIPR000595:IPR005074:IPR001140:IPR003439:IPR 003593; KEGG: ter:Tery_1352 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporters; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; Cyclic nucleotide-bi [...]
 
 
 0.695
AFZ06449.1
PFAM: Hemolysin-type calcium-binding repeat (2 copies); InterPro IPR001343; KEGG: ter:Tery_4192 hemolysin-type calcium-binding region; PFAM: Haemolysin-type calcium-binding repeat; SPTR: Putative Hemolysin-type calcium-binding region.
  
    0.684
AFZ05720.1
PFAM: Hemolysin-type calcium-binding repeat (2 copies); InterPro IPR001343; KEGG: jan:Jann_1066 hemolysin-type calcium-binding protein; PFAM: Haemolysin-type calcium-binding repeat; SPTR: Putative uncharacterized protein.
  
    0.649
AFZ09907.1
Na-Ca exchanger/integrin-beta4; PFAM: Hemolysin-type calcium-binding repeat (2 copies); Calx-beta domain; COGs: COG2931 RTX toxins and related Ca2+-binding protein; InterPro IPR003644:IPR013517:IPR001343; KEGG: ter:Tery_4644 allergen V5/TPX-1 related; PFAM: Na-Ca exchanger/integrin-beta4; FG-GAP; Haemolysin-type calcium-binding repeat; SMART: Na-Ca exchanger/integrin-beta4; SPTR: Putative uncharacterized protein.
  
    0.641
AFZ06224.1
PFAM: Hemolysin-type calcium-binding repeat (2 copies); InterPro IPR001343; KEGG: ter:Tery_1355 hemolysin-type calcium-binding region; PFAM: Haemolysin-type calcium-binding repeat; SPTR: Oscillin.
  
    0.637
AFZ08350.1
PFAM: Lipase (class 3); Hemolysin-type calcium-binding repeat (2 copies); InterPro IPR001343; KEGG: cyj:Cyan7822_1606 peptidase S8 and S53 subtilisin kexin sedolisin; PFAM: Haemolysin-type calcium-binding repeat; SPTR: Putative uncharacterized protein.
  
    0.636
AFZ06450.1
PFAM: Hemolysin-type calcium-binding repeat (2 copies); COGs: COG3889 solute binding protein; InterPro IPR001343; KEGG: ter:Tery_4191 hemolysin-type calcium-binding region; PFAM: Haemolysin-type calcium-binding repeat; SPTR: Putative uncharacterized protein.
  
    0.628
AFZ04874.1
Cna B domain protein; PFAM: Hemolysin-type calcium-binding repeat (2 copies); Cna protein B-type domain; COGs: COG0810 Periplasmic protein TonB links inner and outer membranes; InterPro IPR008454:IPR001343; KEGG: ter:Tery_3048 Cna B-type; PFAM: Collagen-binding surface protein Cna-like, B-type domain; Haemolysin-type calcium-binding repeat; SPTR: Putative uncharacterized protein.
 
  
 0.625
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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