STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ08030.1PFAM: Glycosyl transferase family 2; COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: ter:Tery_2749 glycosyl transferase family protein; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase family protein. (505 aa)    
Predicted Functional Partners:
AFZ06491.1
Short-chain dehydrogenase/reductase SDR; PFAM: Fatty acid hydroxylase superfamily; short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: ter:Tery_1743 bifunctional sterol desaturase/short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Oxidoreductase, short chain dehydrogenase/reductase family.
   
 0.911
AFZ04782.1
Lipase class 2; COGs: COG1075 acetyltransferase and hydrolase with the alpha/beta hydrolase fold; InterPro IPR002918; KEGG: npu:Npun_R0869 lipase, class 2; PFAM: Lipase, class 2; SPTR: Lipase, class 2.
     
  0.900
AFZ04783.1
Protein of unknown function DUF676 hydrolase domain protein; COGs: COG1075 acetyltransferase and hydrolase with the alpha/beta hydrolase fold; InterPro IPR007751; KEGG: npu:Npun_R0869 lipase, class 2; PFAM: Domain of unknown function DUF676, hydrolase-like; SPTR: Lipase, class 2.
     
  0.900
AFZ10040.1
PFAM: Prokaryotic diacylglycerol kinase; COGs: COG0818 Diacylglycerol kinase; InterPro IPR000829; KEGG: ter:Tery_5028 diacylglycerol kinase; PFAM: Diacylglycerol kinase, prokaryotic; SPTR: Diacylglycerol kinase.
     
  0.900
AFZ06432.1
PFAM: Polysaccharide deacetylase; COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509; KEGG: syp:SYNPCC7002_A1994 polysaccharide deacetylase domain-containing protein; PFAM: Polysaccharide deacetylase; SPTR: Polysaccharide deacetylase domain containing protein.
 
  
 0.835
AFZ06691.1
PFAM: Polysaccharide deacetylase; COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509; KEGG: ana:all4345 polysaccharide deacetylase; PFAM: Polysaccharide deacetylase; SPTR: Polysaccharide deacetylase.
 
  
 0.739
AFZ06489.1
PFAM: Polysaccharide deacetylase; COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509; KEGG: ava:Ava_4797 polysaccharide deacetylase; PFAM: Polysaccharide deacetylase; SPTR: Putative uncharacterized protein.
 
  
 0.702
AFZ09460.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PFAM: EAL domain; CBS domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; COGs: COG2200 FOG: EAL domain; InterProIPR000014:IPR000160:IPR000644:IPR001610:IPR 001633:IPR013767; KEGG: npu:Npun_F5467 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); PFAM: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS fold; Cystathionine beta-synthase, core; SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAC motif; PA [...]
  
  
 0.596
AFZ09181.1
PFAM: Glycosyl transferase family 2; Tetratricopeptide repeat; COGs: COG1216 glycosyltransferase; InterProIPR001440:IPR013105:IPR001173:IPR019734:IPR 003107; KEGG: ter:Tery_2707 glycosyl transferase family protein; PFAM: Glycosyl transferase, family 2; Tetratricopeptide TPR-1; Tetratricopeptide TPR2; SMART: Tetratricopeptide repeat; RNA-processing protein, HAT helix; SPTR: Putative Glycosyl transferase, family 2.
  
 
 0.542
AFZ08681.1
PFAM: Glycosyltransferase family 9 (heptosyltransferase); Glycosyl transferases group 1; Tetratricopeptide repeat; COGs: COG3063 Tfp pilus assembly protein PilF; InterProIPR019734:IPR006597:IPR001440:IPR002201:IPR 013105:IPR011716:IPR001296; KEGG: ter:Tery_0481 TPR repeat-containing protein; PFAM: Glycosyl transferase, group 1; Tetratricopeptide TPR2; Glycosyl transferase, family 9; Tetratricopeptide TPR-1; Tetratricopeptide TPR-3; SPTR: TPR repeat.
  
 
 0.539
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.