STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ08109.1KEGG: cyh:Cyan8802_1587 hypothetical protein; SPTR: Putative uncharacterized protein. (368 aa)    
Predicted Functional Partners:
AFZ08108.1
Tetratricopeptide TPR_1 repeat-containing protein; InterPro IPR019734:IPR001440; KEGG: cyj:Cyan7822_6655 WD40 repeat, subgroup; PFAM: Tetratricopeptide TPR-1; SPTR: Putative uncharacterized protein.
       0.773
AFZ08107.1
PFAM: Protein of unknown function (DUF1822); InterPro IPR014951; KEGG: npu:Npun_F1636 hypothetical protein; PFAM: Protein of unknown function DUF1822; SPTR: Putative uncharacterized protein.
   
   0.684
AFZ08106.1
KEGG: amr:AM1_2924 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.604
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.