STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ08154.1KEGG: ter:Tery_2412 ABC-2 type transporter; SPTR: Putative uncharacterized protein. (266 aa)    
Predicted Functional Partners:
AFZ08155.1
Sulfate-transporting ATPase; PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: npu:Npun_F0551 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Sulfate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related.
 
 
 0.982
AFZ08152.1
PFAM: ABC-type uncharacterized transport system; Vta1 like; COGs: COG3225 ABC-type uncharacterized transport system involved in gliding motility auxiliary component; InterPro IPR019196; KEGG: ava:Ava_4232 hypothetical protein; PFAM: ABC-type uncharacterised transport system; SPTR: Putative uncharacterized protein.
 
  
 0.909
AFZ07617.1
PFAM: Protein of unknown function (DUF1565); TIGRFAM: parallel beta-helix repeat (two copies); InterPro IPR022441:IPR006626:IPR011459; KEGG: npu:Npun_F3983 hypothetical protein; PFAM: Domain of unknown function DUF1565; SMART: Parallel beta-helix repeat; SPTR: Putative uncharacterized protein; TIGRFAM: Parallel beta-helix repeat-2.
  
 
 0.864
AFZ05491.1
FHA modulated ABC efflux pump with fused ATPase and integral membrane subunits; PFAM: ABC transporter; FHA domain; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR000253:IPR003593:IPR003439:IPR013525; KEGG: ter:Tery_4431 FHA domain-containing protein; PFAM: ABC transporter-like; Forkhead-associated (FHA) domain; ABC-2 type transporter; PRIAM: Polyamine-transporting ATPase; SMART: ATPase, AAA+ type, core; Forkhead-associated (FHA) domain; SPTR: FHA domain containing protein.
  
 
 0.848
AFZ10112.1
PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: ter:Tery_4399 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related.
 
 
 0.831
AFZ05682.1
Sulfate-transporting ATPase; PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: ana:alr0077 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Sulfate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter ATP-binding protein.
  
 
 0.801
AFZ06174.1
Fe(3+)-transporting ATPase; PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: npu:Npun_F2805 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Fe(3+)-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter ATP-binding protein.
  
 
 0.801
AFZ06199.1
Sulfate-transporting ATPase; PFAM: ABC transporter; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: ava:Ava_0191 ABC transporter-like; PFAM: ABC transporter-like; PRIAM: Sulfate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Daunorubicin resistance ABC transporter ATPase subunit.
  
 
 0.801
AFZ08151.1
KEGG: ava:Ava_4233 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.691
AFZ08153.1
TIGRFAM: conserved hypothetical protein (putative transposase or invertase); InterPro IPR010106; KEGG: ter:Tery_2497 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP01784.
  
    0.513
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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