STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ08343.1PFAM: HI0933-like protein; TIGRFAM: flavoprotein, HI0933 family; COGs: COG2081 flavoprotein; InterPro IPR004792; KEGG: cyc:PCC7424_3520 HI0933 family protein; PFAM: Conserved hypothetical protein CHP00275, flavoprotein HI0933-like; SPTR: Fumarate reductase/succinate dehydrogenase flavoprotein-like protein; TIGRFAM: Conserved hypothetical protein CHP00275, flavoprotein HI0933-like. (427 aa)    
Predicted Functional Partners:
AFZ08342.1
Rubredoxin-type Fe(Cys)4 protein; PFAM: Rubredoxin; COGs: COG1773 Rubredoxin; InterPro IPR004039; KEGG: dhd:Dhaf_3080 rubredoxin-type Fe(Cys)4 protein; PFAM: Rubredoxin-type Fe(Cys)4 protein; SPTR: Rubredoxin.
       0.763
AFZ08344.1
KEGG: gvi:glr3989 hypothetical protein; SPTR: Glr3989 protein.
       0.513
AFZ10239.1
Deoxyribodipyrimidine photo-lyase type I; PFAM: FAD binding domain of DNA photolyase; DNA photolyase; TIGRFAM: deoxyribodipyrimidine photo-lyase, 8-HDF type; COGs: COG0415 Deoxyribodipyrimidine photolyase; InterPro IPR006050:IPR005101; KEGG: ana:alr2725 deoxyribopyrimidine photolyase; PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; DNA photolyase, N-terminal; PRIAM: Deoxyribodipyrimidine photo-lyase; SPTR: Deoxyribopyrimidine photolyase.
  
    0.434
AFZ08341.1
Hypothetical protein; PFAM: ChaB; KEGG: npu:Npun_R3257 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.419
AFZ08345.1
Class II aldolase/adducin family protein; PFAM: Class II Aldolase and Adducin N-terminal domain; COGs: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase; InterPro IPR001303; KEGG: npu:Npun_R0622 hypothetical protein; PFAM: Class II aldolase/adducin, N-terminal; SPTR: Putative uncharacterized protein.
       0.404
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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