STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ08433.1Hypothetical protein; InterPro IPR012902; KEGG: npu:Npun_F0067 hypothetical protein; SPTR: Putative Prepilin-type N-terminal cleavage/methylation domain protein. (218 aa)    
Predicted Functional Partners:
AFZ06891.1
PFAM: Bacterial type II secretion system protein F domain; COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR018076; KEGG: ter:Tery_1745 type II secretion system protein; PFAM: Type II secretion system F domain; SPTR: Type II secretion system protein.
  
  
 0.677
AFZ08434.1
KEGG: ana:all1770 hypothetical protein; SPTR: Putative uncharacterized protein.
  
  
 0.639
AFZ08432.1
KEGG: ter:Tery_4120 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.631
AFZ06893.1
PFAM: GSPII_E N-terminal domain; Type II/IV secretion system protein; COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR007831:IPR001482; KEGG: ter:Tery_1748 type II secretion system protein E; PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; SPTR: Type II secretion system protein E.
  
 
 0.599
AFZ07828.1
Hypothetical protein; PFAM: GSPII_E N-terminal domain; KEGG: npu:Npun_F2747 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
 0.599
AFZ07719.1
PFAM: Competence protein; TIGRFAM: ComEC/Rec2-related protein; COGs: COG0658 membrane metal-binding protein; InterPro IPR004477; KEGG: ter:Tery_3864 ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; SPTR: ComEC/Rec2-related protein; TIGRFAM: ComEC/Rec2-related protein.
  
  
 0.568
AFZ08435.1
PHA accumulation regulator DNA-binding protein; PFAM: Type II transport protein GspH; COGs: COG4970 Tfp pilus assembly protein FimT; InterPro IPR012902; KEGG: ter:Tery_4117 PHA accumulation regulator DNA-binding-like; SPTR: Putative uncharacterized protein.
  
  
 0.528
AFZ09112.1
Prepilin peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
  
  
 0.438
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.