STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ08473.1KEGG: ava:Ava_3949 hypothetical protein; SPTR: Putative uncharacterized protein. (325 aa)    
Predicted Functional Partners:
AFZ08472.1
PFAM: Bacterial capsule synthesis protein PGA_cap; COGs: COG2843 Putative protein of poly-gamma-glutamate biosynthesis (capsule formation); InterPro IPR019079; KEGG: pjd:Pjdr2_2496 putative protein of poly-gamma-glutamate biosynthesis (capsule formation)-like protein; PFAM: Capsule synthesis protein, CapA; SMART: Capsule synthesis protein, CapA; SPTR: Putative uncharacterized protein.
       0.556
AFZ08474.1
PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: cyn:Cyan7425_1109 protein of unknown function DUF820; PFAM: Domain of unknown function DUF820; SPTR: Putative uncharacterized protein.
       0.556
AFZ04685.1
Phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; COGs: COG2236 phosphoribosyltransferase; InterPro IPR000836; KEGG: npu:Npun_R1761 phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; SPTR: Phosphoribosyltransferase.
  
     0.532
AFZ09642.1
KEGG: cyh:Cyan8802_0726 putative transcriptional regulator, CopG/Arc/MetJ family; SPTR: Putative transcriptional regulator, CopG/Arc/MetJ family.
  
     0.422
AFZ08960.1
PFAM: Ankyrin repeat; COGs: COG0666 FOG: Ankyrin repeat; InterPro IPR002110; KEGG: tel:tlr0828 hypothetical protein; PFAM: Ankyrin repeat; SMART: Ankyrin repeat; SPTR: Putative uncharacterized protein.
  
 
 
 0.415
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.