STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ08573.1PFAM: O-Antigen ligase; InterPro IPR007016; KEGG: ava:Ava_4842 O-antigen polymerase; PFAM: O-antigen ligase-related; SPTR: Putative O-Antigen Polymerase family. (473 aa)    
Predicted Functional Partners:
AFZ08572.1
PFAM: Polysaccharide biosynthesis/export protein; COGs: COG1596 Periplasmic protein involved in polysaccharide export; InterPro IPR003715; KEGG: npu:Npun_R5507 polysaccharide export protein; PFAM: Polysaccharide export protein; SPTR: Polysaccharide biosynthesis/export protein.
 
  
 0.647
AFZ08571.1
Capsular exopolysaccharide family; PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family; COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR005702:IPR003856; KEGG: cyn:Cyan7425_2153 capsular exopolysaccharide family; PFAM: Lipopolysaccharide biosynthesis; PRIAM: Non-specific protein-tyrosine kinase; SPTR: Putative Capsular exopolysaccharide family protein; TIGRFAM: Exopolysaccharide synthesis protein.
  
  
 0.475
AFZ04966.1
PFAM: Glycosyl transferases group 1; Glycosyl transferase family 2; COGs: COG0438 Glycosyltransferase; InterPro IPR001173:IPR001296; KEGG: ter:Tery_1360 glycosyl transferase, group 1; PFAM: Glycosyl transferase, group 1; Glycosyl transferase, family 2; SPTR: Glycosyl transferase, group 1.
  
  
 0.451
AFZ07641.1
TspO and MBR related protein; PFAM: TspO/MBR family; COGs: COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog); InterPro IPR004307; KEGG: ava:Ava_0789 TspO and MBR related proteins; PFAM: TspO/MBR-related protein; SPTR: TspO and MBR like proteins.
  
     0.450
AFZ08400.1
Hypothetical protein; PFAM: Domain of unknown function (DUF2382); PRC-barrel domain; TIGRFAM: conserved domain; COGs: COG3861 conserved hypothetical protein; InterPro IPR007903:IPR019060:IPR011756; KEGG: cyc:PCC7424_3366 hypothetical protein; PFAM: Domain of unknown function DUF2382, C-terminal; PRC-barrel; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02271, C-terminal.
  
     0.450
AFZ08463.1
KEGG: ter:Tery_3039 hypothetical protein; SPTR: Putative uncharacterized protein.
  
  
 0.441
AFZ08869.1
TspO and MBR related protein; PFAM: TspO/MBR family; COGs: COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog); InterPro IPR004307; KEGG: cyc:PCC7424_0487 TspO and MBR like protein; PFAM: TspO/MBR-related protein; SPTR: TspO and MBR like protein.
  
     0.430
AFZ08119.1
KEGG: npu:Npun_F3847 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.411
AFZ10088.1
PFAM: domain; Glycosyl hydrolases family 2, sugar binding domain; COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterPro IPR006104:IPR006102; KEGG: fjo:Fjoh_4102 beta-galactosidase; PFAM: Glycoside hydrolase, family 2, carbohydrate-binding; Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich; SPTR: Putative Beta-galactosidase.
  
     0.408
AFZ05105.1
KEGG: npu:Npun_R1321 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.403
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.