STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ08611.1Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. (278 aa)    
Predicted Functional Partners:
AFZ08612.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; PFAM: Branched-chain amino acid transport system / permease component; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: hau:Haur_3004 inner-membrane translocator; PFAM: ABC transporter permease; SPTR: Putative Inner-membrane translocator.
       0.482
AFZ08610.1
KEGG: tva:TVAG_403720 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.441
AFZ08609.1
KEGG: cyt:cce_1228 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.436
AFZ07138.1
PFAM: Peptidase C39 family; InterPro IPR005074; KEGG: mmg:MTBMA_c00490 peptidase; PFAM: Peptidase C39, bacteriocin processing; SPTR: Putative uncharacterized protein.
  
     0.405
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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