STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ08625.1PFAM: Alternative oxidase; KEGG: ava:Ava_1055 alternative oxidase; SPTR: Plastoquinol oxidase immutans. (229 aa)    
Predicted Functional Partners:
AFZ06181.1
PFAM: Manganese-stabilising protein / photosystem II polypeptide; InterPro IPR002628; KEGG: npu:Npun_F4810 photosystem II manganese-stabilizing protein PsbO; PFAM: Photosystem II PsbO, manganese-stabilising; SPTR: Photosystem II manganese-stabilizing protein PsbO.
  
  
  0.715
psb28
PFAM: Psb28 protein; TIGRFAM: photosystem II reaction center protein Psb28; HAMAP: Photosystem II Psb28, class 1; InterPro IPR005610; KEGG: ana:all0801 photosystem II reaction center protein Psb28; PFAM: Photosystem II Psb28, class 1; SPTR: Photosystem II reaction center Psb28 protein; TIGRFAM: Photosystem II Psb28, class 1; Belongs to the Psb28 family.
  
  
  0.712
AFZ06095.1
GUN4 domain protein; PFAM: GUN4-like; InterPro IPR008629; KEGG: npu:Npun_R5642 GUN4 domain-containing protein; PFAM: GUN4-like; SPTR: GUN4-like family.
  
     0.676
AFZ07706.1
Protein of unknown function YGGT; PFAM: YGGT family; InterPro IPR003425; KEGG: npu:Npun_F5950 protein of unknown function YGGT; PFAM: Uncharacterised protein family Ycf19; SPTR: Putative uncharacterized protein.
  
     0.651
AFZ05070.1
KEGG: npu:Npun_F5248 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.624
AFZ08624.1
Hypothetical protein; PFAM: Hexameric tyrosine-coordinated heme protein (HTHP); KEGG: npu:Npun_F2116 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.608
AFZ06814.1
Hypothetical protein; PFAM: Chloroplast import component protein (Tic20); KEGG: ter:Tery_3886 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.607
thf1
Protein thf1; May be involved in photosynthetic membrane biogenesis.
  
     0.606
AFZ10156.1
PFAM: Protein of unknown function (DUF3007); KEGG: cyj:Cyan7822_2351 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.594
AFZ08697.1
Protein of unknown function DUF2358; PFAM: Uncharacterized conserved protein (DUF2358); InterPro IPR018790; KEGG: ter:Tery_0014 hypothetical protein; PFAM: Protein of unknown function DUF2358; SPTR: Putative uncharacterized protein.
  
     0.575
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.