STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ08629.1DNA polymerase beta domain protein region; PFAM: Nucleotidyltransferase domain; COGs: COG1669 nucleotidyltransferase; InterPro IPR002934; KEGG: rca:Rcas_2416 DNA polymerase subunit beta; PFAM: Nucleotidyl transferase domain; SPTR: Putative uncharacterized protein. (115 aa)    
Predicted Functional Partners:
AFZ08628.1
KEGG: mxa:MXAN_5521 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.431
AFZ07268.1
Protein of unknown function DUF540; PFAM: Etoposide-induced protein 2.4 (EI24); COGs: COG2981 Uncharacterized protein involved in cysteine biosynthesis; InterPro IPR007496; KEGG: ter:Tery_0890 hypothetical protein; PFAM: Uncharacterised protein family CysZ; SPTR: Putative uncharacterized protein.
  
     0.417
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.