STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ08677.1PFAM: Fic/DOC family; TIGRFAM: death-on-curing family protein; COGs: COG3654 Prophage maintenance system killer protein; InterPro IPR006440:IPR003812; KEGG: cyc:PCC7424_2885 death-on-curing family protein; PFAM: Filamentation induced by cAMP/death on curing-related; SPTR: Death-on-curing family protein; TIGRFAM: Death-on-curing protein. (128 aa)    
Predicted Functional Partners:
AFZ08678.1
KEGG: cyc:PCC7424_2884 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.774
AFZ08679.1
uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; Uroporphyrinogen-III synthase HemD; TIGRFAM: uroporphyrin-III C-methyltransferase; COGs: COG0007 Uroporphyrinogen-III methylase; InterPro IPR006366:IPR000878:IPR003754; KEGG: npu:Npun_R1866 uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole methylase; Tetrapyrrole biosynthesis, uroporphyrinogen III synthase; PRIAM: Uroporphyrinogen-III C-methyltransferase., Uroporphyrinogen-III synthase; SPTR: Uroporphyrinogen III methylase; TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal; Belongs to [...]
       0.671
AFZ08680.1
PFAM: Glycosyl transferase family 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR013217:IPR001173; KEGG: cya:CYA_1012 macrocin-O-methyltransferase domain-containing protein; PFAM: Glycosyl transferase, family 2; Methyltransferase type 12; SPTR: Macrocin-O-methyltransferase domain protein.
       0.451
AFZ08676.1
Tetratricopeptide TPR_1 repeat-containing protein; PFAM: Trypsin; Tetratricopeptide repeat; COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR019734:IPR001440; KEGG: ter:Tery_0291 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat; SPTR: TPR repeat-containing protein.
       0.428
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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