STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ08752.1AAA ATPase central domain protein; PFAM: ATPase family associated with various cellular activities (AAA); COGs: COG0464 ATPase of the AAA+ class; InterPro IPR003593:IPR003959; KEGG: ter:Tery_1047 AAA ATPase, central region; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core; SPTR: AAA ATPase, central region. (506 aa)    
Predicted Functional Partners:
AFZ08751.1
PFAM: Protein of unknown function (DUF1257); InterPro IPR009666; KEGG: ava:Ava_4766 hypothetical protein; PFAM: Uncharacterised protein family Ycf35; SPTR: Putative uncharacterized protein.
 
   
 0.774
AFZ08753.1
KEGG: ter:Tery_1048 hypothetical protein; SPTR: Putative uncharacterized protein.
     
 0.651
AFZ07671.1
PFAM: Protein of unknown function (DUF1257); InterPro IPR009666; KEGG: ter:Tery_2578 hypothetical protein; PFAM: Uncharacterised protein family Ycf35; SPTR: Putative uncharacterized protein.
 
   
 0.646
AFZ07934.1
PFAM: Caspase domain; InterPro IPR011600; KEGG: ter:Tery_2624 peptidase C14, caspase catalytic subunit P20; PFAM: Peptidase C14, caspase catalytic; SPTR: Putative Peptidase C14, caspase catalytic subunit p20.
   
 0.577
AFZ04650.1
DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
  
 
 0.529
AFZ08193.1
PFAM: Protein of unknown function (DUF1257); InterPro IPR009666; KEGG: cyn:Cyan7425_2425 protein of unknown function DUF1257; PFAM: Uncharacterised protein family Ycf35; SPTR: Putative uncharacterized protein.
 
   
 0.506
AFZ05406.1
Hypothetical protein; PFAM: Domain of unknown function (DUF1768); TIGRFAM: conserved hypothetical protein, ribA/ribD-fused; COGs: COG3236 conserved hypothetical protein; InterPro IPR012816; KEGG: npu:Npun_F1822 hypothetical protein; PFAM: Conserved hypothetical protein CHP02464; SPTR: Swarming motility protein ybiA; TIGRFAM: Conserved hypothetical protein CHP02464.
    
 
 0.481
AFZ08067.1
KEGG: bhy:BHWA1_01612 hypothetical protein; SPTR: Vegetative cell wall protein gp1.
    
 
 0.481
AFZ10388.1
Hypothetical protein; PFAM: Domain of unknown function (DUF1768); TIGRFAM: conserved hypothetical protein, ribA/ribD-fused; COGs: COG3236 conserved hypothetical protein; InterPro IPR012816; KEGG: ana:all5029 hypothetical protein; PFAM: Conserved hypothetical protein CHP02464; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02464.
    
 
 0.481
AFZ08057.1
PFAM: Hsp70 protein; COGs: COG0443 Molecular chaperone; InterPro IPR013126; KEGG: ava:Ava_0572 heat shock protein HSP70; PFAM: Heat shock protein 70; SPTR: Heat shock protein 70.
 
 
 0.466
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.