STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ08927.1PFAM: Protein of unknown function (DUF820); InterPro IPR008538; KEGG: npu:Npun_F3750 hypothetical protein; PFAM: Domain of unknown function DUF820; SPTR: Putative uncharacterized protein. (187 aa)    
Predicted Functional Partners:
AFZ08926.1
KEGG: ana:alr3505 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.503
AFZ06796.1
PFAM: Protein of unknown function (DUF820); InterPro IPR008538; KEGG: ana:asr4228 hypothetical protein; PFAM: Domain of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
     0.483
AFZ07157.1
PFAM: Protein of unknown function (DUF433); COGs: COG2442 conserved hypothetical protein; InterPro IPR007367; KEGG: mar:MAE_56090 hypothetical protein; PFAM: Protein of unknown function DUF433; SPTR: Putative uncharacterized protein.
  
     0.456
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.