STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ09098.1Cl- channel voltage-gated family protein; PFAM: Voltage gated chloride channel; COGs: COG0038 Chloride channel protein EriC; InterPro IPR001807; KEGG: hse:Hsero_2467 chloride channel protein; PFAM: Chloride channel, voltage gated; SPTR: Chloride channel protein. (427 aa)    
Predicted Functional Partners:
AFZ09097.1
Sodium/proton antiporter, CPA1 family; PFAM: Universal stress protein family; Sodium/hydrogen exchanger family; COGs: COG0025 NhaP-type Na+/H+ and K+/H+ antiporter; InterPro IPR006153:IPR006016; KEGG: syp:SYNPCC7002_G0073 hypothetical protein; PFAM: Cation/H+ exchanger; UspA; SPTR: Putative uncharacterized protein; TC 2.A.36.
  
  
 0.500
AFZ07008.1
PFAM: Protein of unknown function (DUF3050); KEGG: cai:Caci_3258 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.466
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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