STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ09276.1PFAM: DNA/RNA non-specific endonuclease; 3-carboxy-cis,cis-muconate lactonizing enzyme; COGs: COG1864 DNA/RNA endonuclease G NUC1; InterPro IPR001604:IPR020821; KEGG: cyj:Cyan7822_6035 YD repeat-containing protein; PFAM: DNA/RNA non-specific endonuclease; SMART: DNA/RNA non-specific endonuclease; Extracellular Endonuclease, subunit A; SPTR: YD repeat protein. (1717 aa)    
Predicted Functional Partners:
rnz
RNAse Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.
   
   0.728
AFZ05171.1
Hypothetical protein; PFAM: O-methyltransferase; KEGG: cbi:CLJ_B2931 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.727
AFZ05962.1
NAD(P)-dependent nickel-iron dehydrogenase flavin-containing subunit; PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 24 Kd subunit; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterPro IPR011538:IPR019554:IPR019575; KEGG: cyj:Cyan7822_3471 NADH dehydrogenase; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; PRIAM: NADH dehydrogenase (qui [...]
  
    0.628
AFZ07951.1
Amino acid adenylation domain protein; PFAM: Phosphopantetheine attachment site; Thioesterase domain; AMP-binding enzyme; Condensation domain; PilZ domain; TIGRFAM: amino acid adenylation domain; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterProIPR020806:IPR010071:IPR001242:IPR000873:IPR 009875:IPR006163:IPR001031; KEGG: npu:Npun_R6588 amino acid adenylation domain-containing protein; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Type IV pilus assembly PilZ; Phosphopantetheine-binding; Thioesterase; PRIAM: Glutamate racemase; SMART: Poly [...]
  
  
 0.592
AFZ07779.1
KEGG: scl:sce1270 hypothetical protein; SPTR: HIRAN domain family.
  
     0.570
AFZ10296.1
KEGG: ter:Tery_0389 hypothetical protein; SPTR: Putative uncharacterized protein.
  
   
 0.567
AFZ04852.1
Amino acid adenylation domain protein; PFAM: Phosphopantetheine attachment site; Thioesterase domain; Condensation domain; AMP-binding enzyme; Glycosyl transferase family 2; TIGRFAM: amino acid adenylation domain; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterProIPR010071:IPR001173:IPR001242:IPR000873:IPR 006163:IPR001031:IPR020806; KEGG: npu:Npun_F2183 amino acid adenylation domain-containing protein; PFAM: AMP-dependent synthetase/ligase; Glycosyl transferase, family 2; Condensation domain; Phosphopantetheine-binding; Thioesterase; SMART: Polyketide [...]
  
    0.562
AFZ05971.1
Pyruvate ferredoxin/flavodoxin oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin.
   
   0.492
AFZ04984.1
Nitric oxide reductase, NorZ apoprotein; PFAM: Cytochrome C and Quinol oxidase polypeptide I; COGs: COG3256 Nitric oxide reductase large subunit; KEGG: amr:AM1_A0139 cytochrome b subunit of nitric oxide reductase; SPTR: Cytochrome b subunit of nitric oxide reductase.
  
 
 0.486
AFZ05791.1
KEGG: npu:Npun_F2448 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.476
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.