STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ09317.1PFAM: Protein of unknown function (DUF1230); InterPro IPR009631; KEGG: ter:Tery_4640 hypothetical protein; PFAM: Uncharacterised protein family Ycf36; SPTR: Putative uncharacterized protein. (169 aa)    
Predicted Functional Partners:
rsfS
Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.
       0.791
AFZ10051.1
PFAM: PsaD; InterPro IPR003685; KEGG: ter:Tery_3791 photosystem I protein PsaD; PFAM: Photosystem I PsaD; SPTR: Photosystem I protein PsaD.
  
     0.770
AFZ06095.1
GUN4 domain protein; PFAM: GUN4-like; InterPro IPR008629; KEGG: npu:Npun_R5642 GUN4 domain-containing protein; PFAM: GUN4-like; SPTR: GUN4-like family.
  
     0.768
AFZ07327.1
PFAM: Protein of unknown function (DUF2499); InterPro IPR019634; KEGG: naz:Aazo_2746 hypothetical protein; PFAM: Uncharacterised protein family Ycf49; SPTR: Putative uncharacterized protein.
  
     0.768
AFZ05877.1
GUN4 domain protein; PFAM: GUN4-like; InterPro IPR008629; KEGG: ter:Tery_3945 GUN4-like; PFAM: GUN4-like; SPTR: GUN4-like.
  
     0.765
psaE
Photosystem I reaction center subunit IV; Stabilizes the interaction between PsaC and the PSI core, assists the docking of the ferredoxin to PSI and interacts with ferredoxin-NADP oxidoreductase; Belongs to the PsaE family.
  
     0.763
AFZ05786.1
FAD dependent oxidoreductase; COGs: COG0644 Dehydrogenase (flavoprotein); InterPro IPR006076; KEGG: ter:Tery_0494 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; SPTR: Transposase.
  
     0.762
AFZ05160.1
GUN4 domain protein; PFAM: GUN4-like; InterPro IPR008629; KEGG: npu:Npun_F5475 GUN4 domain-containing protein; PFAM: GUN4-like; SPTR: Ycf53-like protein.
  
     0.761
AFZ06737.1
GUN4 domain protein; PFAM: GUN4-like; InterPro IPR008629; KEGG: cyn:Cyan7425_2446 GUN4 domain protein; PFAM: GUN4-like; SPTR: GUN4 domain protein.
  
     0.761
AFZ04690.1
Ferredoxin thioredoxin reductase beta chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin.
  
     0.759
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.