STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ09372.1PFAM: Bacterial regulatory proteins, gntR family; COGs: COG1725 transcriptional regulator protein; InterPro IPR000524; KEGG: ava:Ava_3734 GntR family transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; SPTR: GntR family transcriptional regulator. (328 aa)    
Predicted Functional Partners:
AFZ10307.1
PFAM: Protein of unknown function (DUF3120); KEGG: cyt:cce_1935 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.755
AFZ07423.1
KEGG: ter:Tery_1229 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.743
AFZ06709.1
PFAM: Protein of unknown function (DUF3146); KEGG: ter:Tery_2871 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.682
AFZ09653.1
KEGG: ana:alr4310 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.681
AFZ07991.1
KEGG: ava:Ava_2412 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.677
AFZ09373.1
PFAM: Nitroreductase family; COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: aca:ACP_2901 nitroreductase family protein; PFAM: Nitroreductase-like; SPTR: NADH dehydrogenase.
       0.677
AFZ08525.1
KEGG: ter:Tery_3215 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.666
AFZ08033.1
PFAM: Alpha/beta hydrolase of unknown function (DUF1400); InterPro IPR010802; KEGG: ter:Tery_2897 hypothetical protein; PFAM: Domain of unknown function DUF1400; SPTR: Putative uncharacterized protein.
  
     0.664
AFZ08491.1
PFAM: Protein of unknown function (DUF2839); KEGG: cyn:Cyan7425_0942 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.646
AFZ05507.1
KEGG: ter:Tery_2373 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.612
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.