STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ09400.1PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain; COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterPro IPR006104:IPR006103; KEGG: cyn:Cyan7425_2021 glycoside hydrolase family 2 sugar binding; PFAM: Glycoside hydrolase, family 2, carbohydrate-binding; Glycoside hydrolase, family 2, TIM barrel; SPTR: Glycoside hydrolase family 2 sugar binding. (627 aa)    
Predicted Functional Partners:
AFZ04905.1
PFAM: Galactokinase galactose-binding signature; GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: galactokinase; COGs: COG0153 Galactokinase; InterPro IPR000705:IPR019539:IPR006204:IPR013750; KEGG: npu:Npun_F0213 galactokinase; PFAM: Galactokinase galactose-binding domain; GHMP kinase; GHMP kinase, C-terminal; PRIAM: Galactokinase; SPTR: Galactokinase; TIGRFAM: Galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
 
  
 0.831
AFZ09403.1
UDP-galactopyranose mutase; PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; KEGG: npu:Npun_F0220 UDP-galactopyranose mutase; SPTR: UDP-galactopyranose mutase.
 
     0.736
AFZ09529.1
PFAM: Metallopeptidase family M24; COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR000994; KEGG: npu:Npun_F0212 peptidase M24; PFAM: Peptidase M24, structural domain; SPTR: Peptidase M24.
 
  
 0.704
AFZ09399.1
KEGG: msv:Mesil_1304 beta-glucosidase/6-phospho-beta-glucosidase/beta -galactosidase; SPTR: Putative uncharacterized protein.
 
   
 0.680
AFZ09530.1
PFAM: Galactose-1-phosphate uridyl transferase, C-terminal domain; Galactose-1-phosphate uridyl transferase, N-terminal domain; TIGRFAM: galactose-1-phosphate uridylyltransferase, family 1; COGs: COG1085 Galactose-1-phosphate uridylyltransferase; InterPro IPR001937:IPR005849:IPR005850; KEGG: npu:Npun_F0208 galactose-1-phosphate uridylyltransferase; PFAM: Galactose-1-phosphate uridyl transferase, N-terminal; Galactose-1-phosphate uridyl transferase, C-terminal; PRIAM: UDP-glucose--hexose-1-phosphate uridylyltransferase; SPTR: Galactose-1-phosphate uridylyltransferase; TIGRFAM: Galactose [...]
 
     0.643
AFZ05235.1
Alpha-mannosidase; PFAM: Glycosyl hydrolases family 38 C-terminal domain; Glycosyl hydrolases family 38 N-terminal domain; Alpha mannosidase, middle domain; COGs: COG0383 Alpha-mannosidase; InterPro IPR000602:IPR015341:IPR011682; KEGG: npu:Npun_F4313 glycosyl hydrolase 38 protein; PFAM: Glycosyl hydrolases 38, C-terminal; Glycoside hydrolase, family 38, core; Glycoside hydrolase, family 38, central domain; PRIAM: Alpha-mannosidase; SMART: Glycoside hydrolase, family 38, central domain; SPTR: Glycosyl hydrolase 38 domain protein.
 
   
 0.576
AFZ07276.1
PFAM: Glycosyl hydrolases family 39; InterPro IPR000514; KEGG: nde:NIDE2815 putative glycoside hydrolase, family 5; PFAM: Glycoside hydrolase, family 39; SPTR: Putative beta-xylosidase diverged, family 5/39 of glycosylhydrolases and alpha-amylase C.
  
   
 0.547
AFZ09401.1
Hypothetical protein; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; KEGG: ter:Tery_0920 anti-sigma-factor antagonist; SPTR: Putative Anti-sigma factor antagonist.
 
     0.511
AFZ07215.1
KEGG: ana:alr7640 hypothetical protein; SPTR: Alr7640 protein.
  
 
 0.488
AFZ09947.1
KEGG: npu:Npun_R4714 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.470
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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