STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ09419.1PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: ana:alr1224 hypothetical protein; PFAM: Domain of unknown function DUF820; SPTR: Putative uncharacterized protein. (203 aa)    
Predicted Functional Partners:
AFZ09274.1
PFAM: DNA/RNA non-specific endonuclease; COGs: COG1864 DNA/RNA endonuclease G NUC1; InterPro IPR001604:IPR020821; KEGG: cyj:Cyan7822_6035 YD repeat-containing protein; PFAM: DNA/RNA non-specific endonuclease; SMART: DNA/RNA non-specific endonuclease; Extracellular Endonuclease, subunit A; SPTR: YD repeat protein.
  
     0.574
AFZ09418.1
PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; COGs: COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M); InterPro IPR010227:IPR001750; KEGG: npu:Npun_R4289 NAD(P)H-quinone oxidoreductase subunit D4; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; PRIAM: NADH dehydrogenase (quinone); SPTR: NAD(P)H-quinone oxidoreductase subunit D4; TIGRFAM: NADH-quinone oxidoreductase, chain M/4.
       0.533
AFZ09470.1
PFAM: Protein of unknown function (DUF820); InterPro IPR008538; KEGG: cyj:Cyan7822_1038 hypothetical protein; PFAM: Domain of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
     0.522
AFZ09827.1
PFAM: DNA/RNA non-specific endonuclease; COGs: COG1864 DNA/RNA endonuclease G NUC1; InterPro IPR001604:IPR020821; KEGG: cyj:Cyan7822_6035 YD repeat-containing protein; PFAM: DNA/RNA non-specific endonuclease; SMART: DNA/RNA non-specific endonuclease; Extracellular Endonuclease, subunit A; SPTR: YD repeat protein.
  
     0.495
AFZ09417.1
PFAM: CO2 hydration protein (ChpXY); TIGRFAM: CO2 hydration protein; InterPro IPR010220; KEGG: cyj:Cyan7822_2890 CO2 hydration protein; PFAM: CO2 hydration; SPTR: CO2 hydration protein; TIGRFAM: CO2 hydration.
 
     0.427
AFZ09832.1
Polypeptide-transport-associated domain protein FtsQ-type; Essential cell division protein.
  
     0.426
AFZ09978.1
PFAM: Protein of unknown function (DUF820); InterPro IPR008538; KEGG: npu:Npun_R3739 hypothetical protein; PFAM: Domain of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
     0.424
AFZ07260.1
PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: gvi:glr2347 hypothetical protein; PFAM: Domain of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
     0.415
AFZ06337.1
PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: npu:Npun_F3988 hypothetical protein; PFAM: Domain of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
     0.408
AFZ09977.1
PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: npu:Npun_R3739 hypothetical protein; PFAM: Domain of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
     0.407
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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