STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ09453.1PFAM: Major Facilitator Superfamily; InterPro IPR011701; KEGG: npu:Npun_R4099 major facilitator transporter; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator transporter. (416 aa)    
Predicted Functional Partners:
AFZ07679.1
Helix-turn-helix domain protein; PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: ter:Tery_2752 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: XRE family transcriptional regulator.
  
     0.597
AFZ05623.1
PFAM: Predicted periplasmic protein (DUF2233); KEGG: ana:all7320 hypothetical protein; SPTR: All7320 protein.
  
     0.479
AFZ05863.1
PFAM: Alpha/beta hydrolase of unknown function (DUF1400); InterPro IPR010802; KEGG: npu:Npun_F5770 hypothetical protein; PFAM: Domain of unknown function DUF1400; SPTR: Putative uncharacterized protein.
  
     0.435
AFZ09452.1
PFAM: Carbohydrate-selective porin, OprB family; S-layer homology domain; InterPro IPR001119:IPR007049; KEGG: npu:Npun_F2347 carbohydrate-selective porin OprB; PFAM: Carbohydrate-selective porin OprB; S-layer homology domain; SPTR: Carbohydrate-selective porin OprB; TC 1.B.23; Belongs to the OprB family.
       0.432
AFZ06901.1
PFAM: Phycobilisome degradation protein nblA; InterPro IPR007574; KEGG: mar:MAE_02520 phycobilisome degradation protein; PFAM: Phycobilisome degradation protein NblA; SPTR: Putative uncharacterized protein.
  
     0.406
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.