STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ09466.1KEGG: ana:asr0064 hypothetical protein; SPTR: Putative uncharacterized protein. (77 aa)    
Predicted Functional Partners:
AFZ07844.1
KEGG: ava:Ava_3220 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.770
AFZ06921.1
KEGG: naz:Aazo_4704 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.769
AFZ05537.1
KEGG: ana:all0139 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.768
AFZ06401.1
PFAM: Transglutaminase-like superfamily; COGs: COG1305 Transglutaminase-like protein; InterPro IPR002931; KEGG: ter:Tery_1534 transglutaminase-like; PFAM: Transglutaminase-like; SMART: Transglutaminase-like; SPTR: Transglutaminase-like; manually curated.
  
     0.763
AFZ05994.1
KEGG: ter:Tery_3953 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.762
AFZ07185.1
KEGG: ter:Tery_2426 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.759
AFZ06287.1
KEGG: npu:Npun_F3852 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.746
AFZ04833.1
KEGG: ter:Tery_1908 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.744
AFZ04853.1
KEGG: ter:Tery_4714 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.735
AFZ05207.1
PFAM: Protein of unknown function (DUF2993); KEGG: ter:Tery_1292 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.726
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.