STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ09468.1Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter; COGs: COG3839 ABC-type sugar transport systems ATPase components; InterPro IPR003593:IPR003439:IPR013611; KEGG: npu:Npun_F5477 ABC transporter related; PFAM: ABC transporter-like; Transport-associated OB, type 2; PRIAM: Glycerol-3-phosphate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Sugar ABC transportor, ATP-binding protein. (384 aa)    
Predicted Functional Partners:
AFZ08843.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: ava:Ava_0563 binding-protein dependent transport system inner membrane protein; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: ABC transporter sugar permease.
 
 
 0.955
AFZ06843.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: cyn:Cyan7425_3980 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Permease protein of sugar ABC transporter.
 
 
 0.954
AFZ08806.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: cyc:PCC7424_1896 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Putative permease protein of sugar ABC transporter, membrane component.
 
 
 0.954
AFZ05509.1
PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: ana:all5282 ABC transporter sugar permease; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: ABC transporter sugar permease.
 
 0.933
AFZ06824.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: syp:SYNPCC7002_A1255 lactose transport system permease protein LacG; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Permease protein of sugar ABC transporter.
 
 0.933
AFZ08807.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: cyc:PCC7424_1897 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component.
 
 0.930
AFZ08808.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter; TOBE domain; COGs: COG3839 ABC-type sugar transport systems ATPase components; InterPro IPR003593:IPR003439:IPR013611; KEGG: amr:AM1_1478 sugar ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; Transport-associated OB, type 2; PRIAM: Glycerol-3-phosphate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Sugar ABC transporter, ATP-binding protein.
  
  
 
0.909
AFZ09963.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter; TOBE domain; COGs: COG3839 ABC-type sugar transport systems ATPase components; InterPro IPR003593:IPR003439:IPR013611; KEGG: npu:Npun_R5940 ABC transporter related; PFAM: ABC transporter-like; Transport-associated OB, type 2; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related.
  
  
 
0.908
AFZ08656.1
PFAM: Bacterial extracellular solute-binding protein; COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: cyn:Cyan7425_3276 extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Extracellular solute-binding protein family 1.
 
 0.885
AFZ04723.1
Phosphonate-transporting ATPase; PFAM: ABC transporter; COGs: COG1122 ABC-type cobalt transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: npu:Npun_F6159 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related.
 
    
0.871
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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