STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ09579.1PFAM: SPFH domain / Band 7 family; FHA domain; COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR001107:IPR000253; KEGG: rrs:RoseRS_1667 FHA domain-containing protein; PFAM: Band 7 protein; Forkhead-associated (FHA) domain; SMART: Forkhead-associated (FHA) domain; Band 7 protein; SPTR: FHA domain protein. (371 aa)    
Predicted Functional Partners:
AFZ10268.1
Dihydrolipoyllysine-residue acetyltransferase; PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form; COGs: COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) protein; InterPro IPR000089:IPR004167:IPR001078; KEGG: ana:alr3606 branched-chain alpha-keto acid dehydrogenase subunit E2; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; E3 binding; Biotin/lipoyl attachment; PRIAM: Dihydrolipoylly [...]
   
 0.731
AFZ05212.1
Peptidoglycan-binding domain 1 protein; PFAM: Chitinase class I; Putative peptidoglycan binding domain; Penicillin-insensitive murein endopeptidase; InterPro IPR002477; KEGG: hch:HCH_00681 hypothetical protein; PFAM: Peptidoglycan binding-like; SPTR: Carboxypeptidase.
 
     0.647
AFZ09575.1
PFAM: Dynamin family; InterPro IPR001401; KEGG: psl:Psta_1465 hypothetical protein; PFAM: Dynamin, GTPase domain; SPTR: Dynamin family protein.
  
 
 
 0.592
AFZ05681.1
GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family; TIGRFAM: mycothiol synthase; InterPro IPR000182; KEGG: rca:Rcas_2701 GCN5-like N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Putative Acetyltransferase.
  
     0.579
AFZ05009.1
GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family; TIGRFAM: mycothiol synthase; InterPro IPR000182; KEGG: rca:Rcas_3024 GCN5-like N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Putative Acetyltransferase.
  
     0.570
AFZ09181.1
PFAM: Glycosyl transferase family 2; Tetratricopeptide repeat; COGs: COG1216 glycosyltransferase; InterProIPR001440:IPR013105:IPR001173:IPR019734:IPR 003107; KEGG: ter:Tery_2707 glycosyl transferase family protein; PFAM: Glycosyl transferase, family 2; Tetratricopeptide TPR-1; Tetratricopeptide TPR2; SMART: Tetratricopeptide repeat; RNA-processing protein, HAT helix; SPTR: Putative Glycosyl transferase, family 2.
 
 
 0.560
AFZ06096.1
PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II; COGs: COG0069 Glutamate synthase domain 2; InterPro IPR000583:IPR006982:IPR002932:IPR002489; KEGG: cyj:Cyan7822_2992 glutamate synthase (ferredoxin); PFAM: Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, central-C; Glutamate synthase, alpha subunit, C-terminal; PRIAM: Glutamate synthase (ferredoxin); SPTR: Glutamate synthase (Ferredoxin).
   
 
 0.524
AFZ06965.1
PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II; COGs: COG0069 Glutamate synthase domain 2; InterPro IPR000583:IPR006982:IPR002932:IPR002489; KEGG: ter:Tery_0466 glutamate synthase (ferredoxin); PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal; PRIAM: Glutamate synthase (ferredoxin); SPTR: Glutamate synthase (Ferredoxin).
   
 
 0.524
AFZ10331.1
PFAM: Ribulose bisphosphate carboxylase, small chain; ATPase family associated with various cellular activities (AAA); COGs: COG4451 Ribulose bisphosphate carboxylase small subunit; InterPro IPR000894:IPR003959; KEGG: ava:Ava_3903 ribulose 1,5-bisphosphate carboxylase small subunit; PFAM: Ribulose bisphosphate carboxylase, small chain; ATPase, AAA-type, core; SMART: Ribulose bisphosphate carboxylase, small chain; SPTR: Ribulose bisphosphate carboxylase/oxygenase activase.
  
 
 0.486
AFZ09003.1
DNA methylase N-4/N-6 domain protein; PFAM: D12 class N6 adenine-specific DNA methyltransferase; InterPro IPR002941; KEGG: dda:Dd703_1306 hypothetical protein; PFAM: DNA methylase N-4/N-6; SPTR: DNA methyltransferase.
  
     0.482
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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