STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ09592.1PFAM: Protein of unknown function (DUF1822); InterPro IPR014951; KEGG: ter:Tery_4960 hypothetical protein; PFAM: Protein of unknown function DUF1822; SPTR: Putative uncharacterized protein. (280 aa)    
Predicted Functional Partners:
AFZ09593.1
KEGG: cyj:Cyan7822_4257 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
AFZ09591.1
Hypothetical protein.
       0.581
AFZ09590.1
Sel1 domain protein repeat-containing protein; PFAM: Tetratricopeptide repeat; COGs: COG4995 conserved hypothetical protein; InterPro IPR019734:IPR006597:IPR001440; KEGG: ter:Tery_4958 TPR repeat-containing protein; PFAM: Sel1-like; Tetratricopeptide TPR-1; SPTR: TPR repeat.
       0.447
AFZ09594.1
PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; COGs: COG2242 Precorrin-6B methylase 2; InterPro IPR012818:IPR014008:IPR000878; KEGG: ter:Tery_0210 precorrin-6Y C5,15-methyltransferase (decarboxylating); PFAM: Tetrapyrrole methylase; PRIAM: Precorrin-6Y C(5,15)-methyltransferase (decarboxylating); SPTR: Precorrin-6Y C5,15-methyltransferase (Decarboxylating); TIGRFAM: Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransfera [...]
       0.419
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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