STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ09655.1PFAM: Radical SAM superfamily; COGs: COG1032 Fe-S oxidoreductase; InterPro IPR006638:IPR007197; KEGG: npu:Npun_R3902 radical SAM domain-containing protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Putative uncharacterized protein. (526 aa)    
Predicted Functional Partners:
AFZ09922.1
KEGG: amr:AM1_4246 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.773
AFZ06182.1
KEGG: naz:Aazo_1899 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.734
AFZ09653.1
KEGG: ana:alr4310 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.719
AFZ07856.1
PFAM: Protein of unknown function (DUF2811); KEGG: ter:Tery_2217 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.693
AFZ05333.1
KEGG: ava:Ava_0665 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.692
AFZ06522.1
PFAM: CO2 hydration protein (ChpXY); TIGRFAM: CO2 hydration protein; InterPro IPR010220; KEGG: naz:Aazo_4081 CO2 hydration protein; PFAM: CO2 hydration; SPTR: CO2 hydration protein; TIGRFAM: CO2 hydration.
  
     0.679
AFZ07761.1
Nuclear transport factor 2; InterPro IPR002075; KEGG: cyj:Cyan7822_4501 hypothetical protein; PFAM: Nuclear transport factor 2; SPTR: Putative uncharacterized protein.
  
     0.667
AFZ07342.1
PFAM: Domain of unknown function (DUF1816); InterPro IPR014945; KEGG: ava:Ava_4414 hypothetical protein; PFAM: Protein of unknown function DUF1816; SPTR: Putative uncharacterized protein.
  
     0.646
AFZ08525.1
KEGG: ter:Tery_3215 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.644
AFZ07760.1
Orange carotenoid-binding protein; PFAM: Nuclear transport factor 2 (NTF2) domain; Orange carotenoid protein, N-terminal; InterPro IPR015233:IPR002075; KEGG: npu:Npun_R5144 nuclear transport factor 2; PFAM: Orange carotenoid-binding protein, N-terminal; Nuclear transport factor 2; SPTR: Putative uncharacterized protein.
  
     0.629
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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