STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ09700.1Protein of unknown function DUF2257; PFAM: Uncharacterized protein conserved in bacteria (DUF2257); COGs: COG4340 conserved hypothetical protein; InterPro IPR018724; KEGG: ana:all3084 hypothetical protein; PFAM: Protein of unknown function DUF2257; SPTR: Putative uncharacterized protein. (222 aa)    
Predicted Functional Partners:
AFZ07612.1
PFAM: Hemerythrin HHE cation binding domain; COGs: COG5592 conserved hypothetical protein; InterPro IPR012312; KEGG: ava:Ava_3897 hemerythrin HHE cation binding region; PFAM: Haemerythrin/HHE cation-binding motif; SPTR: Hemerythrin HHE cation binding region.
  
     0.488
AFZ09701.1
PFAM: HpcH/HpaI aldolase/citrate lyase family; COGs: COG3836 2 4-dihydroxyhept-2-ene-1 7-dioic acid aldolase; InterPro IPR005000; KEGG: ter:Tery_2821 HpcH/HpaI aldolase; PFAM: Aldehyde-lyase domain; PRIAM: 4-hydroxy-2-oxovalerate aldolase; SPTR: HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family.
       0.451
AFZ05251.1
PFAM: DALR anticodon binding domain; InterPro IPR008909; KEGG: ter:Tery_3617 DALR anticodon binding; PFAM: DALR anticodon binding; SMART: DALR anticodon binding; SPTR: Putative Arginyl tRNA synthetase, anticodon binding.
  
     0.440
AFZ06821.1
ADP-ribosylation/Crystallin J1; PFAM: ADP-ribosylglycohydrolase; InterPro IPR005502; KEGG: ter:Tery_2665 hypothetical protein; PFAM: ADP-ribosylation/Crystallin J1; SPTR: Putative uncharacterized protein.
  
     0.439
AFZ05825.1
Protein of unknown function DUF2231, transmembrane; PFAM: Predicted membrane protein (DUF2231); COGs: COG4244 membrane protein; InterPro IPR019251; KEGG: cyj:Cyan7822_5689 hypothetical protein; PFAM: Protein of unknown function DUF2231, transmembrane; SPTR: Putative uncharacterized protein.
  
     0.420
AFZ09936.1
KEGG: ava:Ava_4530 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.407
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.