STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ09718.1Protein of unknown function UPF0136; PFAM: Transmembrane proteins 14C; COGs: COG5548 Small integral membrane protein; InterPro IPR005349; KEGG: naz:Aazo_1387 hypothetical protein; PFAM: Uncharacterised protein family UPF0136, Transmembrane; SPTR: Putative uncharacterized protein. (107 aa)    
Predicted Functional Partners:
AFZ09719.1
PFAM: Protein of unknown function (DUF815); COGs: COG2607 ATPase (AAA+ superfamily); InterPro IPR003593:IPR003959:IPR008533; KEGG: ter:Tery_4062 hypothetical protein; PFAM: Domain of unknown function DUF815; ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein.
       0.544
AFZ07305.1
PFAM: RAMP superfamily; TIGRFAM: CRISPR-associated RAMP protein, Csx10 family; InterPro IPR005537:IPR013490; KEGG: naz:Aazo_2386 Csx10 family CRISPR-associated RAMP protein; PFAM: Protein of unknown function DUF324; SPTR: Putative uncharacterized protein; TIGRFAM: CRISPR-associated RAMP Csx10.
  
     0.424
AFZ05998.1
PFAM: Protein of unknown function (DUF3352); KEGG: ava:Ava_3131 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.423
AFZ09207.1
PFAM: Phage integrase family; InterPro IPR002104; KEGG: cyj:Cyan7822_3854 integrase family protein; PFAM: Integrase, catalytic core, phage; SPTR: Integrase family protein.
  
     0.421
AFZ07306.1
Protein of unknown function DUF324; PFAM: RAMP superfamily; COGs: COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR005537; KEGG: naz:Aazo_2385 hypothetical protein; PFAM: Protein of unknown function DUF324; SPTR: Putative uncharacterized protein.
  
     0.418
AFZ07307.1
CRISPR-associated protein, Crm2 family; TIGRFAM: CRISPR-associated protein Cas10/Cmr2, subtype III-B; InterPro IPR013407; KEGG: naz:Aazo_2384 Crm2 family CRISPR-associated protein; SPTR: CRISPR-associated protein, Crm2 family; TIGRFAM: CRISPR-associated protein Crm2.
  
     0.405
AFZ07490.1
PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: ter:Tery_3912 histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: Histidine kinase.
  
     0.400
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.