STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ09761.1Beta-lactamase; PFAM: Penicillin binding protein transpeptidase domain; COGs: COG2602 Beta-lactamase class D; InterPro IPR001460; KEGG: amr:AM1_4306 beta-lactamase, putative; PFAM: Penicillin-binding protein, transpeptidase; PRIAM: Beta-lactamase; SPTR: Putative Beta-lactamase. (290 aa)    
Predicted Functional Partners:
AFZ09762.1
ATP-binding region ATPase domain protein; InterPro IPR003594; KEGG: amr:AM1_B0107 transposase, putative; PFAM: ATPase-like, ATP-binding domain; SPTR: Putative uncharacterized protein.
       0.501
AFZ08734.1
Heparan-alpha-glucosaminide N-acetyltransferase; PFAM: Protein of unknown function (DUF1624); COGs: COG4299 conserved hypothetical protein; KEGG: ter:Tery_1515 hypothetical protein; PRIAM: Heparan-alpha-glucosaminide N-acetyltransferase; SPTR: Putative uncharacterized protein.
  
     0.451
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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