STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ09797.1KEGG: ter:Tery_3970 hypothetical protein; SPTR: Putative uncharacterized protein. (364 aa)    
Predicted Functional Partners:
AFZ10012.1
PFAM: RbcX protein; InterPro IPR003435; KEGG: npu:Npun_F4196 chaperonin family protein RbcX; PFAM: Chaperonin-like RbcX; SPTR: RbcX.
  
 
   0.940
cbbL
Ribulose 1,5-bisphosphate carboxylase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site.
    
 
 0.924
AFZ10331.1
PFAM: Ribulose bisphosphate carboxylase, small chain; ATPase family associated with various cellular activities (AAA); COGs: COG4451 Ribulose bisphosphate carboxylase small subunit; InterPro IPR000894:IPR003959; KEGG: ava:Ava_3903 ribulose 1,5-bisphosphate carboxylase small subunit; PFAM: Ribulose bisphosphate carboxylase, small chain; ATPase, AAA-type, core; SMART: Ribulose bisphosphate carboxylase, small chain; SPTR: Ribulose bisphosphate carboxylase/oxygenase activase.
 
 
   0.805
AFZ05785.1
PFAM: Domain of unknown function (DUF1830); InterPro IPR014964; KEGG: npu:Npun_F3903 hypothetical protein; PFAM: Protein of unknown function DUF1830; SPTR: Putative uncharacterized protein.
  
     0.774
AFZ06573.1
PFAM: Protein of unknown function (DUF2396); TIGRFAM: TIGR02652 family protein; InterPro IPR013472; KEGG: ava:Ava_3680 hypothetical protein; PFAM: Conserved hypothetical protein CHP02652; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02652.
  
     0.774
AFZ06908.1
KEGG: ana:alr4514 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.774
AFZ07514.1
PFAM: Domain of unknown function (DUF1830); InterPro IPR014964; KEGG: amr:AM1_4372 hypothetical protein; PFAM: Protein of unknown function DUF1830; SPTR: Putative uncharacterized protein.
  
     0.774
AFZ06609.1
KEGG: ava:Ava_0092 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.773
AFZ09325.1
PFAM: Mo-dependent nitrogenase C-terminus; InterPro IPR009717; KEGG: npu:Npun_R0845 Mo-dependent nitrogenase family protein; PFAM: Mo-dependent nitrogenase, C-terminal; SPTR: Mo-dependent nitrogenase C-terminal domain family protein.
  
     0.773
AFZ09654.1
PFAM: Domain of unknown function (DUF1830); InterPro IPR014964; KEGG: ter:Tery_0672 hypothetical protein; PFAM: Protein of unknown function DUF1830; SPTR: Putative uncharacterized protein.
  
     0.773
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.