STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ09827.1PFAM: DNA/RNA non-specific endonuclease; COGs: COG1864 DNA/RNA endonuclease G NUC1; InterPro IPR001604:IPR020821; KEGG: cyj:Cyan7822_6035 YD repeat-containing protein; PFAM: DNA/RNA non-specific endonuclease; SMART: DNA/RNA non-specific endonuclease; Extracellular Endonuclease, subunit A; SPTR: YD repeat protein. (699 aa)    
Predicted Functional Partners:
rnz
RNAse Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.
   
   0.728
AFZ05962.1
NAD(P)-dependent nickel-iron dehydrogenase flavin-containing subunit; PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 24 Kd subunit; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterPro IPR011538:IPR019554:IPR019575; KEGG: cyj:Cyan7822_3471 NADH dehydrogenase; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; PRIAM: NADH dehydrogenase (qui [...]
   
    0.602
AFZ06557.1
PFAM: Dynamin family; InterPro IPR001401; KEGG: npu:Npun_R6512 dynamin family protein; PFAM: Dynamin, GTPase domain; SPTR: Dynamin family protein.
  
     0.520
AFZ09825.1
KEGG: cyj:Cyan7822_6250 YD repeat protein; SPTR: YD repeat protein.
      0.520
AFZ07468.1
PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: ter:Tery_1466 hypothetical protein; PFAM: Domain of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
     0.519
AFZ09826.1
PFAM: Transposase IS66 family; InterPro IPR004291; KEGG: cyn:Cyan7425_0184 transposase IS66; PFAM: Transposase, IS66; SPTR: Transposase IS66.
       0.516
AFZ09419.1
PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: ana:alr1224 hypothetical protein; PFAM: Domain of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
     0.495
AFZ07779.1
KEGG: scl:sce1270 hypothetical protein; SPTR: HIRAN domain family.
  
     0.474
AFZ05790.1
Hypothetical protein; PFAM: FemAB family; KEGG: npu:Npun_F2450 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.463
AFZ05791.1
KEGG: npu:Npun_F2448 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.450
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.