STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ09970.1Methyltransferase type 11; PFAM: Methyltransferase domain; Low molecular weight phosphotyrosine protein phosphatase; COGs: COG4551 protein tyrosine phosphatase; InterPro IPR017867:IPR013216; KEGG: cyj:Cyan7822_2657 type 11 methyltransferase; PFAM: Methyltransferase type 11; SMART: Protein-tyrosine phosphatase, low molecular weight; SPTR: UbiE/COQ5 methyltransferase (Modular protein). (338 aa)    
Predicted Functional Partners:
AFZ07200.1
Putative signal transduction protein with Nacht domain; PFAM: NACHT domain; COGs: COG5635 NTPase (NACHT family); InterPro IPR004155:IPR003593; KEGG: ana:all3892 hypothetical protein; PFAM: PBS lyase HEAT-like repeat; SMART: ATPase, AAA+ type, core; PBS lyase HEAT-like repeat; SPTR: Putative uncharacterized protein.
  
     0.457
AFZ08007.1
Methyltransferase type 11; PFAM: Methyltransferase domain; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: cyj:Cyan7822_6540 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11.
  
     0.455
AFZ07039.1
Methyltransferase type 11; PFAM: Methyltransferase domain; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: npu:Npun_F6389 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11.
  
     0.406
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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