STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ10000.1PFAM: ABC transporter; TIGRFAM: ABC exporter ATP-binding subunit, DevA family; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR014324:IPR003439; KEGG: tel:tll0643 ATP-binding protein of DevA-like ABC transporter; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; TIGRFAM: ABC transporter ATP-binding subunit, DevA type. (240 aa)    
Predicted Functional Partners:
AFZ06916.1
Protein of unknown function DUF214; PFAM: Predicted permease; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: tel:tll1383 ABC transporter permease protein; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: Putative uncharacterized protein.
 
 0.963
AFZ06917.1
Protein of unknown function DUF214; PFAM: Predicted permease; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: npu:Npun_F5073 hypothetical protein; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: Putative uncharacterized protein.
 
 0.963
AFZ07606.1
Protein of unknown function DUF214; PFAM: Predicted permease; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: ana:alr1506 hypothetical protein; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: Putative uncharacterized protein.
 
 0.963
AFZ10002.1
DevC protein; PFAM: Predicted permease; TIGRFAM: DevC protein; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR005891:IPR003838; KEGG: cya:CYA_1878 glycolipid ABC exporter (DevE) family permease protein; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: Heterocyst specific ABC-transporter, membrane spanning subunit; TIGRFAM: DevC protein.
 
 
 0.853
AFZ08078.1
DevC protein; PFAM: Predicted permease; TIGRFAM: DevC protein; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR005891:IPR003838; KEGG: npu:Npun_F3599 DevC protein; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: Putative uncharacterized protein; TIGRFAM: DevC protein.
 
 
 0.851
AFZ09809.1
PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: npu:Npun_R1770 RND family efflux transporter MFP subunit; PFAM: Secretion protein HlyD; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.845
AFZ10112.1
PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: ter:Tery_4399 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related.
 
   
0.812
AFZ07667.1
PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: tth:TTC0973 dipeptide transport system permease protein DppC; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: ABC transporter, permease protein.
 
 
    0.691
AFZ08079.1
TIGRFAM: ABC exporter membrane fusion protein, DevB family; InterPro IPR014315; KEGG: ana:alr4280 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: ABC transporter membrane fusion protein, DevB type.
 
 
 0.671
AFZ10003.1
TIGRFAM: ABC exporter membrane fusion protein, DevB family; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR014315; KEGG: naz:Aazo_0092 DevB family ABC exporter membrane fusion protein; SPTR: Putative uncharacterized protein; TIGRFAM: ABC transporter membrane fusion protein, DevB type.
 
 
 0.655
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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