STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ10073.1PFAM: Squalene/phytoene synthase; COGs: COG1562 Phytoene/squalene synthetase; InterPro IPR002060; KEGG: ter:Tery_4010 phytoene synthase; PFAM: Squalene/phytoene synthase; PRIAM: Phytoene synthase; SPTR: Phytoene synthase. (309 aa)    
Predicted Functional Partners:
AFZ10074.1
Phytoene desaturase; PFAM: Flavin containing amine oxidoreductase; TIGRFAM: phytoene desaturase; COGs: COG3349 conserved hypothetical protein; InterPro IPR014102:IPR002937; KEGG: naz:Aazo_2875 phytoene desaturase; PFAM: Amine oxidase; PRIAM: Carotene 7,8-desaturase; SPTR: Zeta-carotene desaturase / three-step phytoene desaturase; TIGRFAM: Phytoene desaturase.
  
 0.994
AFZ09543.1
Farnesyltranstransferase; PFAM: Polyprenyl synthetase; COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR000092; KEGG: ter:Tery_4173 farnesyl-diphosphate synthase; PFAM: Polyprenyl synthetase; PRIAM: Farnesyltranstransferase; SPTR: Farnesyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 0.929
AFZ08757.1
PFAM: Polyprenyl synthetase; TIGRFAM: solanesyl diphosphate synthase; COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR014120:IPR000092; KEGG: npu:Npun_R1834 polyprenyl synthetase; PFAM: Polyprenyl synthetase; PRIAM: Trans-hexaprenyltranstransferase; SPTR: Trans-hexaprenyltranstransferase; TIGRFAM: Solanesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 0.920
AFZ09938.1
Geranylgeranyl reductase; PFAM: FAD binding domain; TIGRFAM: geranylgeranyl reductase; geranylgeranyl reductase family; COGs: COG0644 Dehydrogenase (flavoprotein); InterPro IPR010253:IPR011774:IPR011777:IPR013027; KEGG: ava:Ava_1497 geranylgeranyl reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Geranylgeranyl reductase; TIGRFAM: Geranylgeranyl reductase, plant/cyanobacteria; Geranylgeranyl reductase; Geranylgeranyl reductase, plant/prokaryotic.
 
 
 0.914
AFZ05962.1
NAD(P)-dependent nickel-iron dehydrogenase flavin-containing subunit; PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 24 Kd subunit; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterPro IPR011538:IPR019554:IPR019575; KEGG: cyj:Cyan7822_3471 NADH dehydrogenase; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; PRIAM: NADH dehydrogenase (qui [...]
     
 0.867
AFZ05620.1
C-3',4' desaturase CrtD; PFAM: FAD dependent oxidoreductase; TIGRFAM: C-3',4' desaturase CrtD; COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR006076:IPR014104; KEGG: ava:Ava_2342 amine oxidase; PFAM: FAD dependent oxidoreductase; SPTR: Amine oxidase; TIGRFAM: Myxoxanthophyll biosynthesis, C-3',4' desaturase CrtD.
 
  
 0.839
AFZ07075.1
Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
   
 
 0.839
AFZ09458.1
Carotene isomerase; PFAM: FAD dependent oxidoreductase; TIGRFAM: carotene isomerase; COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR014101:IPR013027; KEGG: npu:Npun_R4225 phytoene dehydrogenase-related protein; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PRIAM: All-trans-retinol 13,14-reductase; SPTR: FAD dependent oxidoreductase; TIGRFAM: Carotene isomerase.
 
  
 0.818
AFZ10148.1
All-trans-retinol 13,14-reductase; PFAM: FAD dependent oxidoreductase; TIGRFAM: carotene isomerase; COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR002938; KEGG: ter:Tery_3278 FAD dependent oxidoreductase; PFAM: Monooxygenase, FAD-binding; PRIAM: All-trans-retinol 13,14-reductase; SPTR: FAD dependent oxidoreductase.
  
 0.815
AFZ06804.1
FAD dependent oxidoreductase; PFAM: Flavin containing amine oxidoreductase; TIGRFAM: carotene isomerase; COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR006076; KEGG: npu:Npun_R2646 amine oxidase; PFAM: FAD dependent oxidoreductase; SPTR: Amine oxidase.
 
  
 0.798
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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