STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ10115.1KEGG: bca:BCE_1138 hypothetical protein; SPTR: Putative ATP-binding protein. (1061 aa)    
Predicted Functional Partners:
AFZ10116.1
KEGG: pfd:PFDG_02325 hypothetical protein similar to merozoite antigen erythrocyte-binding ligand; SPTR: Putative uncharacterized protein.
       0.705
AFZ05195.1
NurA domain-containing protein; PFAM: NurA domain; InterPro IPR018977; KEGG: ter:Tery_2615 hypothetical protein; PFAM: NurA domain; SMART: NurA domain; SPTR: Putative uncharacterized protein.
   
 
 0.622
AFZ10114.1
Heat shock protein DnaJ domain protein; PFAM: RDD family; InterPro IPR019734:IPR001623; KEGG: bca:BCE_1143 DnaJ domain-containing protein; PFAM: Heat shock protein DnaJ, N-terminal; SPTR: DnaJ domain protein.
       0.535
AFZ08985.1
PFAM: Glycosyl transferase family 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: mar:MAE_59470 glycosyl transferase; PFAM: Glycosyl transferase, family 2; SPTR: Putative glycosyl transferase.
  
     0.510
AFZ10117.1
KEGG: tps:THAPSDRAFT_23175 hypothetical protein; SPTR: Predicted protein.
       0.444
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.