STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ10148.1All-trans-retinol 13,14-reductase; PFAM: FAD dependent oxidoreductase; TIGRFAM: carotene isomerase; COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR002938; KEGG: ter:Tery_3278 FAD dependent oxidoreductase; PFAM: Monooxygenase, FAD-binding; PRIAM: All-trans-retinol 13,14-reductase; SPTR: FAD dependent oxidoreductase. (499 aa)    
Predicted Functional Partners:
AFZ10073.1
PFAM: Squalene/phytoene synthase; COGs: COG1562 Phytoene/squalene synthetase; InterPro IPR002060; KEGG: ter:Tery_4010 phytoene synthase; PFAM: Squalene/phytoene synthase; PRIAM: Phytoene synthase; SPTR: Phytoene synthase.
  
 0.815
AFZ05399.1
Chlorophyll synthase; PFAM: UbiA prenyltransferase family; TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; chlorophyll synthase, ChlG; COGs: COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferase; InterPro IPR000537:IPR011799:IPR006372; KEGG: cyj:Cyan7822_3054 bacteriochlorophyll/chlorophyll synthetase; PFAM: UbiA prenyltransferase; PRIAM: Chlorophyll synthase; SPTR: Bacteriochlorophyll/chlorophyll a synthase; TIGRFAM: Chlorophyll synthase, ChlG; Bacteriochlorophyll/chlorophyll synthetase.
 
  
 0.644
AFZ07238.1
Protoporphyrin IX magnesium-chelatase; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
 
  
 0.631
AFZ09938.1
Geranylgeranyl reductase; PFAM: FAD binding domain; TIGRFAM: geranylgeranyl reductase; geranylgeranyl reductase family; COGs: COG0644 Dehydrogenase (flavoprotein); InterPro IPR010253:IPR011774:IPR011777:IPR013027; KEGG: ava:Ava_1497 geranylgeranyl reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Geranylgeranyl reductase; TIGRFAM: Geranylgeranyl reductase, plant/cyanobacteria; Geranylgeranyl reductase; Geranylgeranyl reductase, plant/prokaryotic.
 
  
 0.609
AFZ08557.1
PFAM: Magnesium-protoporphyrin IX methyltransferase C-terminus; TIGRFAM: magnesium protoporphyrin O-methyltransferase; COGs: COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol methylase; InterPro IPR010251:IPR010940; KEGG: ter:Tery_4469 Mg-protoporphyrin IX methyl transferase; PFAM: Magnesium-protoporphyrin IX methyltransferase, C-terminal; PRIAM: Magnesium protoporphyrin IX methyltransferase; SPTR: Mg-protoporphyrin IX methyl transferase; TIGRFAM: Magnesium protoporphyrin O-methyltransferase.
  
    0.566
AFZ10149.1
KEGG: ter:Tery_3277 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.554
AFZ08965.1
Cobaltochelatase CobN subunit; PFAM: Domain of unknown function (DUF3479); CobN/Magnesium Chelatase; TIGRFAM: magnesium chelatase, H subunit; COGs: COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatase; InterPro IPR003672:IPR011771; KEGG: npu:Npun_F2940 magnesium chelatase subunit H; PFAM: CobN/magnesium chelatase; PRIAM: Magnesium chelatase; SPTR: Magnesium chelatase subunit H; TIGRFAM: Magnesium-chelatase, subunit H.
  
  
 0.503
AFZ10024.1
Protoporphyrin IX magnesium-chelatase; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
 
  
 0.461
AFZ05412.1
GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family; COGs: COG1246 N-acetylglutamate synthase and related acetyltransferase; InterPro IPR000182; KEGG: ter:Tery_3873 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: GCN5-related N-acetyltransferase.
  
     0.438
AFZ07312.1
PFAM: NAD dependent epimerase/dehydratase family; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: ter:Tery_4630 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase.
  
     0.411
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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