STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ10292.1Helix-turn-helix domain protein; PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: ter:Tery_0919 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Putative uncharacterized protein. (234 aa)    
Predicted Functional Partners:
AFZ08057.1
PFAM: Hsp70 protein; COGs: COG0443 Molecular chaperone; InterPro IPR013126; KEGG: ava:Ava_0572 heat shock protein HSP70; PFAM: Heat shock protein 70; SPTR: Heat shock protein 70.
 
 
 0.891
AFZ09385.1
PFAM: DnaJ domain; InterPro IPR001623; KEGG: ter:Tery_5067 heat shock protein DnaJ-like; PFAM: Heat shock protein DnaJ, N-terminal; SPTR: Heat shock protein DnaJ-like.
 
 
 0.866
AFZ06448.1
KEGG: npu:Npun_R4248 hypothetical protein; SPTR: Putative uncharacterized protein.
 
   
 0.798
groS
10 kDa chaperonin; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.
  
 
 0.796
AFZ09799.1
PFAM: UvrD/REP helicase; COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR000212; KEGG: npu:Npun_F4439 UvrD/REP helicase; PFAM: DNA helicase, UvrD/REP type; SPTR: Putative uncharacterized protein.
 
   
 0.791
AFZ05628.1
PFAM: DnaJ domain; InterPro IPR001623:IPR019734; KEGG: ter:Tery_0757 heat shock protein DnaJ-like; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Tetratricopeptide repeat; SPTR: Heat shock protein DnaJ-like.
 
 
 0.788
AFZ05239.1
KEGG: cyn:Cyan7425_2084 hypothetical protein; SPTR: Putative uncharacterized protein.
 
   
 0.783
AFZ08598.1
KEGG: ter:Tery_4318 hypothetical protein; SPTR: Putative uncharacterized protein.
  
   
 0.779
AFZ05381.1
GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: ter:Tery_4380 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Putative uncharacterized protein.
  
   
 0.773
AFZ10293.1
Anti-sigma-factor antagonist; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; COGs: COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); InterPro IPR003658:IPR002645; KEGG: mar:MAE_59050 anti-sigma-factor antagonist; PFAM: Sulphate transporter/antisigma-factor antagonist STAS; SPTR: Anti-sigma factor antagonist; TIGRFAM: Anti-sigma factor antagonist.
       0.773
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.