STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ10326.1Putative transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: fjo:Fjoh_1392 cyclic nucleotide-binding protein; PFAM: Cyclic nucleotide-binding domain; SPTR: Putative DNA-binding cyclic-nucleotide binding protein. (207 aa)    
Predicted Functional Partners:
AFZ09854.1
PFAM: Endonuclease/Exonuclease/phosphatase family; COGs: COG3021 conserved hypothetical protein; InterPro IPR005135; KEGG: hau:Haur_2679 endonuclease/exonuclease/phosphatase; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Endonuclease/exonuclease/phosphatase.
  
     0.550
pdxJ
Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.
  
     0.528
AFZ10325.1
Hypothetical protein; PFAM: Coenzyme Q (ubiquinone) biosynthesis protein Coq4; COGs: COG5031 Uncharacterized protein involved in ubiquinone biosynthesis; KEGG: amr:AM1_0163 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.518
AFZ09240.1
PFAM: Protein of unknown function (DUF3539); KEGG: naz:Aazo_4424 hypothetical protein; SPTR: Putative uncharacterized protein.
    
 
 0.446
AFZ09766.1
PFAM: Protein of unknown function (DUF3037); KEGG: gvi:gll2766 hypothetical protein; SPTR: Gll2766 protein.
  
     0.427
AFZ09767.1
KEGG: gvi:gll2767 hypothetical protein; SPTR: Gll2767 protein.
  
     0.422
AFZ09704.1
GAF sensor hybrid histidine kinase; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterProIPR003660:IPR003018:IPR003661:IPR003594:IPR 001789; KEGG: ava:Ava_4696 GAF sensor hybrid histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; GAF; HAMP linker domain; Signal transduction response regulator, receiver domain; SMART: ATPase-like, ATP-bindin [...]
   
 
 0.410
AFZ07824.1
PFAM: Translation initiation factor SUI1; TIGRFAM: translation initation factor SUI1, putative, prokaryotic; COGs: COG0023 Translation initiation factor 1 (eIF-1/SUI1) and related protein; InterPro IPR001950; KEGG: ter:Tery_3343 translation initiation factor SUI1; PFAM: Translation initiation factor SUI1; SPTR: Translation initiation factor Sui1.
  
     0.409
AFZ08604.1
Multi-sensor hybrid histidine kinase; PFAM: CBS domain; Response regulator receiver domain; GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; Hpt domain; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014:IPR000644:IPR001610:IPR003018:IPR 003661:IPR003594:IPR001789:IPR013655:IPR013767:IPR008207; KEGG: ter:Tery_4447 multi-sensor hybrid histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domai [...]
  
 
 0.400
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.