STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ10331.1PFAM: Ribulose bisphosphate carboxylase, small chain; ATPase family associated with various cellular activities (AAA); COGs: COG4451 Ribulose bisphosphate carboxylase small subunit; InterPro IPR000894:IPR003959; KEGG: ava:Ava_3903 ribulose 1,5-bisphosphate carboxylase small subunit; PFAM: Ribulose bisphosphate carboxylase, small chain; ATPase, AAA-type, core; SMART: Ribulose bisphosphate carboxylase, small chain; SPTR: Ribulose bisphosphate carboxylase/oxygenase activase. (424 aa)    
Predicted Functional Partners:
AFZ05632.1
PFAM: Mov34/MPN/PAD-1 family; COGs: COG1310 metal-dependent protease of the PAD1/JAB1 superfamily; InterPro IPR000555; KEGG: ter:Tery_1109 Mov34/MPN/PAD-1; PFAM: Mov34/MPN/PAD-1; SMART: Mov34/MPN/PAD-1; SPTR: Mov34/MPN/PAD-1.
  
 0.991
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
   
 0.988
AFZ08159.1
WD-40 repeat-containing protein; PFAM: WD domain, G-beta repeat; COGs: COG2319 FOG: WD40 repeat; InterPro IPR001680:IPR001254:IPR019781; KEGG: ter:Tery_4979 WD-40 repeat-containing protein; PFAM: WD40 repeat, subgroup; Peptidase S1/S6, chymotrypsin/Hap; SPTR: WD-repeat protein.
    
 0.920
AFZ08675.1
Tetratricopeptide TPR_1 repeat-containing protein; PFAM: Trypsin; Tetratricopeptide repeat; COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR019734:IPR001254:IPR001440; KEGG: ter:Tery_0291 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR-1; Peptidase S1/S6, chymotrypsin/Hap; SMART: Tetratricopeptide repeat; SPTR: TPR repeat-containing protein.
    
 0.915
AFZ08676.1
Tetratricopeptide TPR_1 repeat-containing protein; PFAM: Trypsin; Tetratricopeptide repeat; COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR019734:IPR001440; KEGG: ter:Tery_0291 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat; SPTR: TPR repeat-containing protein.
    
 0.915
cbbL
Ribulose 1,5-bisphosphate carboxylase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site.
  
 
 0.829
AFZ09797.1
KEGG: ter:Tery_3970 hypothetical protein; SPTR: Putative uncharacterized protein.
 
 
   0.805
AFZ06908.1
KEGG: ana:alr4514 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.756
AFZ10012.1
PFAM: RbcX protein; InterPro IPR003435; KEGG: npu:Npun_F4196 chaperonin family protein RbcX; PFAM: Chaperonin-like RbcX; SPTR: RbcX.
 
   
 0.756
AFZ09317.1
PFAM: Protein of unknown function (DUF1230); InterPro IPR009631; KEGG: ter:Tery_4640 hypothetical protein; PFAM: Uncharacterised protein family Ycf36; SPTR: Putative uncharacterized protein.
  
     0.751
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.