STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ10337.1KEGG: cyc:PCC7424_3802 hypothetical protein; SPTR: Putative uncharacterized protein. (85 aa)    
Predicted Functional Partners:
AFZ05277.1
KEGG: naz:Aazo_4333 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.775
AFZ10373.1
KEGG: ter:Tery_2605 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.770
AFZ04818.1
TIGRFAM: rod shape-determining protein MreD; InterPro IPR007227; KEGG: npu:Npun_R1839 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Cell shape-determining protein MreD.
  
     0.761
AFZ07050.1
KEGG: cyp:PCC8801_0597 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.758
AFZ06700.1
KEGG: ter:Tery_3889 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.754
AFZ09888.1
KEGG: cyc:PCC7424_1060 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.739
AFZ07384.1
KEGG: ana:all0298 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.728
AFZ07442.1
KEGG: amr:AM1_2824 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.723
AFZ08029.1
KEGG: ter:Tery_2748 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.712
AFZ06061.1
KEGG: ter:Tery_3403 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.699
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.