STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ10374.1Transcriptional attenuator, LytR family; PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain; COGs: COG1316 Transcriptional regulator; InterPro IPR004474; KEGG: ter:Tery_2604 cell envelope-related transcriptional attenuator; PFAM: Cell envelope-related transcriptional attenuator; SPTR: Cell envelope-related transcriptional attenuator; TIGRFAM: Cell envelope-related transcriptional attenuator. (471 aa)    
Predicted Functional Partners:
AFZ07326.1
PFAM: Polysaccharide pyruvyl transferase; TIGRFAM: polysaccharide pyruvyl transferase CsaB; COGs: COG2327 conserved hypothetical protein; InterPro IPR007345:IPR019896; KEGG: ter:Tery_1755 polysaccharide pyruvyl transferase; PFAM: Polysaccharide pyruvyl transferase; SPTR: Polysaccharide pyruvyl transferase; TIGRFAM: Polysaccharide pyruvyl transferase, CsaB.
 
     0.759
AFZ05381.1
GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: ter:Tery_4380 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Putative uncharacterized protein.
  
     0.645
AFZ05385.1
PFAM: Protein of unknown function; TIGRFAM: HAD superfamily (subfamily IIIA) phosphatase, TIGR01668; COGs: COG2179 hydrolase of the HAD superfamily; InterPro IPR019001:IPR010021:IPR006549; KEGG: ter:Tery_4375 HAD family phosphatase; PFAM: Protein of unknown function DUF2010; SPTR: HAD family phosphatase; TIGRFAM: HAD-superfamily phosphatase, subfamily IIIA; HAD-superfamily hydrolase, subfamily IIIA.
  
     0.623
AFZ08336.1
S-layer domain-containing protein; PFAM: S-layer homology domain; InterPro IPR001119; KEGG: ter:Tery_3932 WD-40 repeat-containing protein; PFAM: S-layer homology domain; SPTR: Putative WD-40 repeat.
  
     0.605
AFZ05317.1
Uncharacterized protein family UPF0052; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.
  
     0.600
AFZ06009.1
Parallel beta-helix repeat protein; PFAM: Protein of unknown function (DUF1565); S-layer homology domain; TIGRFAM: parallel beta-helix repeat (two copies); InterProIPR022441:IPR011459:IPR001119:IPR006626:IPR 006633; KEGG: ava:Ava_4228 hypothetical protein; PFAM: Domain of unknown function DUF1565; S-layer homology domain; SMART: Carbohydrate-binding/sugar hydrolysis domain; Parallel beta-helix repeat; SPTR: Putative uncharacterized protein; TIGRFAM: Parallel beta-helix repeat-2.
  
     0.571
AFZ04693.1
PFAM: OstA-like protein; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; COGs: COG1934 conserved hypothetical protein; InterPro IPR005653; KEGG: ter:Tery_2273 OstA-like protein; PFAM: Organic solvent tolerance-like, N-terminal; SPTR: OstA-like protein.
  
     0.561
AFZ10267.1
PFAM: Protein of unknown function (DUF2869); KEGG: ter:Tery_1830 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.553
AFZ05238.1
OstA family protein; PFAM: Protein of unknown function (DUF3769); InterPro IPR005653; KEGG: naz:Aazo_1724 hypothetical protein; PFAM: Organic solvent tolerance-like, N-terminal; SPTR: Putative uncharacterized protein.
  
     0.547
AFZ09670.1
PFAM: Glycosyl transferase WecB/TagA/CpsF family; TIGRFAM: bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family; COGs: COG1922 Teichoic acid biosynthesis protein; InterPro IPR004629; KEGG: mar:MAE_24220 UDP-N-acetyl-D-mannosaminuronic acid transferase; PFAM: Glycosyl transferase WecB/TagA/CpsF; PRIAM: N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase; SPTR: UDP-N-acetyl-D-mannosaminuronic acid transferase; TIGRFAM: Glycosyl transferase WecB/TagA/CpsF; Belongs to the glycosyltransferase 26 family.
 
   
 0.545
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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